iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130927

UUCD1 version

UUC-ViV-01136

Ensembl Protein ID

VIT_04s0069g00760.t01

UniProt Accession

F6H9H5; F6H9H5_VITVI

Genbank Protein ID

CCB48868.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595500

Gene Name

VIT_04s0069g00760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0069g00760	VIT_04s0069g00760.t01	VIT_04s0069g00760.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.50e-74	251.8	120	425

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgy 87
           +Gl N gN+C+ N vLQcL+ +++l  +lle  ++++++++     + ++l+++q  +e   +++ + +sp ++l+ l ++  ++   
   Q: 120  CGLINCGNSCFANVVLQCLAYTRPLVAYLLEkGHRRQCRRN-----DWCFLCEFQVHVERA-SHSPQPFSPINILSRLPSIGGNLGYG 201
           7******************************5555566555.....67**********999.9999********************** PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           +q+Da+Ef++f +d++++ +         +e++ +       ++ ++ +++++li+++F+g+l+sq++c +c ++s+++e+++dl+++
   Q: 202  KQEDAHEFMRFAIDTMQSVC--------LDEFGGE-------KSVHPSSQETTLIQHIFGGHLQSQVICTKCSKISNQYENMMDLTVE 274
           ********************........3444444.......68889999************************************** PP
   S: 176  vpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           ++g+      sl++cL++ft +e l+gen+y+c+ c+++++a+k+l++++ P++L++ LkRf    + ++  k+nk+v+fp++Ldlsp
   Q: 275  IHGDAA----SLEECLDQFTVTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKRF----QSGRFGKLNKRVTFPETLDLSP 354
           *****6....8***************************************************....346668**************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++++   +   ++ Y+L+avvvH   l+    GHYv+y k+  g+W+++dD kVt v+ ++vl+   + aY+l+Y r
   Q: 355  YMSKAVVG---TDVYKLYAVVVHLDMLNAsffGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLS---QGAYMLLYSR 425
           ****5544...89**********995554455********************************...********87 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MPGVSGTGDS CLVCGNLGTK KCSGCKAVRY CSQTCQATHW KSGHKTKCKD FQLSGKANLA 60
DSTTHSGRKA SGVGVNNSNG IALVPSSGTS KILKQSKEIL FPYDEFVEFF NWDKPGFPPC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGAGAGA GAAAGTGAGA AAGTGAGAAA GTCATATATC TGGAGTCTCG CTCTTTCTCT 60
GAGAATCGCC ATTGATTCAA AACCCTAATT CCAGAGGGAG ATAGCGAGAG AGAGCTAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	66.93	2.00e-151	528.00
IUUC-Atr-002997	Amborella trichopoda	64.39	3.00e-167	581.00
IUUC-Aly-005863	Arabidopsis lyrata	67.49	0.00e+00	645.00
IUUC-Ath-007334	Arabidopsis thaliana	68.51	0.00e+00	648.00
IUUC-Bdi-014660	Brachypodium distachyon	61.88	6.00e-161	560.00
IUUC-Bol-015083	Brassica oleracea	68.89	0.00e+00	639.00
IUUC-Bra-017569	Brassica rapa	70.56	0.00e+00	643.00
IUUC-Gma-042958	Glycine max	65.90	0.00e+00	713.00
IUUC-Hvu-047620	Hordeum vulgare	64.48	5.00e-167	581.00
IUUC-Lpe-051385	Leersia perrieri	58.88	1.00e-144	506.00
IUUC-Mtr-057748	Medicago truncatula	66.73	0.00e+00	680.00
IUUC-Mac-065096	Musa acuminata	51.17	0.00e+00	630.00
IUUC-Oba-075131	Oryza barthii	64.65	7.00e-160	557.00
IUUC-Obr-076763	Oryza brachyantha	50.15	3.00e-174	604.00
IUUC-Ogl-077264	Oryza glaberrima	65.15	9.00e-173	600.00
IUUC-Ogu-078646	Oryza glumaepatula	65.15	5.00e-173	600.00
IUUC-Oin-079613	Oryza indica	61.69	2.00e-160	558.00
IUUC-Olo-080250	Oryza longistaminata	65.15	3.00e-173	601.00
IUUC-Ome-081416	Oryza meridionalis	64.85	3.00e-173	601.00
IUUC-Oni-082102	Oryza nivara	64.92	6.00e-172	597.00
IUUC-Opu-083135	Oryza punctata	51.91	1.00e-170	593.00
IUUC-Oru-084644	Oryza rufipogon	65.15	1.00e-172	600.00
IUUC-Osa-086195	Oryza sativa	64.83	1.00e-162	566.00
IUUC-Ppa-095936	Physcomitrella patens	57.60	7.00e-140	491.00
IUUC-Pop-099232	Populus trichocarpa	67.69	0.00e+00	719.00
IUUC-Ppe-101845	Prunus persica	75.56	0.00e+00	641.00
IUUC-Smo-109625	Selaginella moellendorffii	55.26	2.00e-143	502.00
IUUC-Sit-109798	Setaria italica	64.86	8.00e-173	600.00
IUUC-Sly-111333	Solanum lycopersicum	55.90	0.00e+00	734.00
IUUC-Stu-112696	Solanum tuberosum	73.67	4.00e-136	476.00
IUUC-Sbi-113982	Sorghum bicolor	48.74	8.00e-170	590.00
IUUC-Tca-121521	Theobroma cacao	72.23	0.00e+00	723.00
IUUC-Tae-125546	Triticum aestivum	64.48	1.00e-167	583.00
IUUC-Tur-126423	Triticum urartu	66.93	1.00e-151	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence