iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099483

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_573353; POPTR_0014s18890g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s18890	POPTR_0014s18890.1	POPTR_0014s18890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.3	158	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ +  +++ CgH+f+++C+          +++++CP+Cr
   Q: 158  CPICLCPLVE-EMSTKCGHIFCKTCIADA------IKRQAKCPTCR 196
           ********88.456************444......79********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTQTQGVKS PPLRGYRRRK TVLDLNAPPT EGRGDEGTSS RTEPQGVQAS QQGQSLPPPT 60
IDVDVFDDDV IESSPTAFAE AKNNSRRARG RAVVVDVESG RTSRLSHNNL NKRRRVPPNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATAATTGAA TTCAAATCTG TCTCTCAATT TATTTTGACG ATTTTGTTTT CTTTGCAGAG 60
TCAAGGTCTT TATAGGTAAT TTGATTCGAT TTTCTTTTCT GCTTGATTTA ATCGGATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0014s18890g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	47.22	5.00e-20	90.90
IUUC-Aml-002206	Ailuropoda melanoleuca	37.10	4.00e-09	53.90
IUUC-Apl-004120	Anas platyrhynchos	37.10	7.00e-10	56.20
IUUC-Aly-006041	Arabidopsis lyrata	50.71	2.00e-38	150.00
IUUC-Ath-007007	Arabidopsis thaliana	48.50	4.00e-37	147.00
IUUC-Ame-011555	Astyanax mexicanus	39.34	1.00e-10	58.50
IUUC-Bta-012913	Bos taurus	38.71	2.00e-09	54.70
IUUC-Bol-015546	Brassica oleracea	48.50	2.00e-34	138.00
IUUC-Bra-016991	Brassica rapa	48.50	2.00e-38	151.00
IUUC-Cfa-020868	Canis familiaris	38.71	1.00e-09	55.50
IUUC-Cpo-022249	Cavia porcellus	37.10	3.00e-09	54.30
IUUC-Csa-024125	Chlorocebus sabaeus	37.10	3.00e-09	54.30
IUUC-Dre-028145	Danio rerio	40.98	1.00e-10	58.50
IUUC-Dno-029605	Dasypus novemcinctus	37.10	4.00e-09	53.90
IUUC-Ete-032694	Echinops telfairi	37.10	7.00e-10	56.20
IUUC-Eca-033443	Equus caballus	37.10	4.00e-09	53.90
IUUC-Fca-035507	Felis catus	37.10	3.00e-09	54.30
IUUC-Fal-037382	Ficedula albicollis	37.10	1.00e-09	55.80
IUUC-Gac-042194	Gasterosteus aculeatus	40.32	6.00e-11	60.10
IUUC-Gma-043026	Glycine max	57.89	2.00e-45	174.00
IUUC-Ggo-044726	Gorilla gorilla	37.10	4.00e-09	53.90
IUUC-Hsa-046212	Homo sapiens	37.10	4.00e-09	53.90
IUUC-Hvu-047067	Hordeum vulgare	43.24	1.00e-18	86.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	37.10	4.00e-09	53.90
IUUC-Kpa-049340	Komagataella pastoris	39.29	3.00e-06	46.20
IUUC-Loc-051907	Lepisosteus oculatus	41.94	2.00e-10	58.50
IUUC-Laf-054145	Loxodonta africana	37.10	1.00e-09	55.50
IUUC-Mcc-055689	Macaca mulatta	37.10	4.00e-09	53.90
IUUC-Meu-056654	Macropus eugenii	38.71	5.00e-10	56.60
IUUC-Mtr-058638	Medicago truncatula	61.64	2.00e-35	142.00
IUUC-Mga-059303	Meleagris gallopavo	37.10	6.00e-10	56.60
IUUC-Mmr-061355	Microcebus murinus	37.10	4.00e-09	53.90
IUUC-Mac-064845	Musa acuminata	38.64	2.00e-28	119.00
IUUC-Mpu-066522	Mustela putorius furo	37.10	4.00e-09	53.90
IUUC-Mlu-067065	Myotis lucifugus	37.10	3.00e-09	54.30
IUUC-Nle-069768	Nomascus leucogenys	37.10	2.00e-09	54.70
IUUC-Opr-071141	Ochotona princeps	37.10	3.00e-09	54.30
IUUC-Ocu-074030	Oryctolagus cuniculus	37.10	2.00e-09	54.70
IUUC-Obr-076406	Oryza brachyantha	57.14	3.00e-18	85.10
IUUC-Ogl-077094	Oryza glaberrima	60.66	4.00e-19	87.40
IUUC-Oin-079992	Oryza indica	60.66	4.00e-19	87.40
IUUC-Ome-081943	Oryza meridionalis	60.66	5.00e-19	87.80
IUUC-Opu-083644	Oryza punctata	59.02	1.00e-18	85.90
IUUC-Osa-086110	Oryza sativa	60.66	4.00e-19	87.40
IUUC-Ola-086970	Oryzias latipes	38.71	1.00e-09	55.50
IUUC-Olu-087634	Ostreococcus lucimarinus	48.08	1.00e-10	58.90
IUUC-Oga-088242	Otolemur garnettii	37.10	4.00e-09	53.90
IUUC-Ptr-091254	Pan troglodytes	38.71	1.00e-10	58.90
IUUC-Pan-092919	Papio anubis	37.10	4.00e-09	53.90
IUUC-Psi-093929	Pelodiscus sinensis	37.10	9.00e-10	56.20
IUUC-Pfo-097412	Poecilia formosa	40.98	4.00e-10	57.00
IUUC-Pab-097663	Pongo abelii	37.10	3.00e-09	54.30
IUUC-Ppe-101755	Prunus persica	62.50	4.00e-34	136.00
IUUC-Rno-105460	Rattus norvegicus	37.10	3.00e-09	54.30
IUUC-Sit-109738	Setaria italica	57.14	2.00e-14	71.20
IUUC-Stu-112694	Solanum tuberosum	51.23	8.00e-41	159.00
IUUC-Sar-113601	Sorex araneus	37.10	4.00e-09	53.90
IUUC-Ssc-115911	Sus scrofa	37.10	4.00e-09	53.90
IUUC-Tru-117663	Takifugu rubripes	40.91	2.00e-11	61.20
IUUC-Tca-121320	Theobroma cacao	62.20	1.00e-51	195.00
IUUC-Tae-124360	Triticum aestivum	47.22	6.00e-20	90.50
IUUC-Tur-126363	Triticum urartu	46.30	2.00e-19	89.00
IUUC-Ttr-128950	Tursiops truncatus	37.10	3.00e-09	54.70
IUUC-Vvi-131506	Vitis vinifera	54.95	5.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence