iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098997

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_1099412; POPTR_0014s13550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13550	POPTR_0014s13550.1	POPTR_0014s13550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-11	45.9	178	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCledf  k+ ++v+pC+H+fh++C+  w      ++ + +CP+Cr
   Q: 178  CAICLEDFepKESVMVTPCNHMFHEECIVPW------AKSNGKCPVCR 219
           ********88777******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNSSTNNVTR TPSYWYSEQD YDDTYAPNNS SRNYQRMPTF SHFRRSASQA RPEPNRGGSQ 60
DTWRPAVEER AITVPLGLAG FSMQPASPVQ VLFLNTRLAR ELPGPSRQRN WQASSSTQAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTTGTTT TATGGACAGA ATTTCTGATC ATCATCGTCT CTGCTGGGTG CTTGGAAGTC 60
ACCATGAACA GCAGCACCAA CAATGTCACG CGAACCCCAT CGTATTGGTA CAGTGAACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0014s13550g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005601	Arabidopsis lyrata	48.28	2.00e-29	122.00
IUUC-Ath-007601	Arabidopsis thaliana	46.15	2.00e-31	128.00
IUUC-Bol-015686	Brassica oleracea	51.75	2.00e-36	145.00
IUUC-Bra-017303	Brassica rapa	53.10	9.00e-40	156.00
IUUC-Eeu-035101	Erinaceus europaeus	41.07	2.00e-11	61.20
IUUC-Gma-043742	Glycine max	44.50	6.00e-43	166.00
IUUC-Lpe-050959	Leersia perrieri	50.00	5.00e-14	70.10
IUUC-Mtr-057929	Medicago truncatula	37.27	5.00e-41	160.00
IUUC-Mlu-068071	Myotis lucifugus	33.33	2.00e-13	69.30
IUUC-Oba-075788	Oryza barthii	42.03	2.00e-25	108.00
IUUC-Obr-076331	Oryza brachyantha	38.51	6.00e-25	106.00
IUUC-Ogl-077650	Oryza glaberrima	42.03	1.00e-25	109.00
IUUC-Ogu-077952	Oryza glumaepatula	42.03	8.00e-26	110.00
IUUC-Oin-079751	Oryza indica	41.30	3.00e-25	107.00
IUUC-Olo-081017	Oryza longistaminata	34.78	1.00e-24	107.00
IUUC-Ome-081103	Oryza meridionalis	41.30	5.00e-25	107.00
IUUC-Oni-082573	Oryza nivara	41.30	3.00e-25	107.00
IUUC-Opu-083625	Oryza punctata	42.75	6.00e-25	106.00
IUUC-Oru-084894	Oryza rufipogon	41.30	3.00e-25	107.00
IUUC-Osa-086183	Oryza sativa	41.30	3.00e-25	107.00
IUUC-Ppe-102043	Prunus persica	40.17	1.00e-40	159.00
IUUC-Sit-110291	Setaria italica	34.60	1.00e-26	112.00
IUUC-Sly-110877	Solanum lycopersicum	36.82	3.00e-36	144.00
IUUC-Stu-112701	Solanum tuberosum	38.86	2.00e-36	145.00
IUUC-Sbi-113836	Sorghum bicolor	43.48	3.00e-26	111.00
IUUC-Tca-121325	Theobroma cacao	45.58	2.00e-54	205.00
IUUC-Vvi-131422	Vitis vinifera	51.65	2.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence