iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098999

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_666450; POPTR_0015s08550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s08550	POPTR_0015s08550.1	POPTR_0015s08550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.50e-32	110.5	278	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           e+f+CpIslelM+dPv++++G+tydrssI++wl+ g+ tcP+t+++lt+++lvPn tlr+liq++c + 
   Q: 278  EDFRCPISLELMTDPVTVSTGQTYDRSSIQRWLKAGNMTCPKTGERLTSTELVPNSTLRKLIQQFCTDV 346
           79****************************************************************876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIQNFDQTDR RILTFPAVHP CEAISPATLL NSLINLSQNI CNYQSKLFAT QRKNARQTIR 60
QIGLLLLFFE ETRDRRLALS DSVVLCFSEL HLAFQKVQFL LEDCTREGAK LWILIKFQIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAAATTCG ATCATAGTTC TCTCAACTCC CAAGTTTCAA CCCAGCAAAA AGAAAAGGAA 60
GAAAACCCAC CCAAAACAGA ACAGAGTAAA TACAGAGGAT CCTCCTTCCT GTTTTTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0015s08550g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Obr-076695	Oryza brachyantha	38.18	9.00e-75	273.00
IUUC-Sly-111836	Solanum lycopersicum	60.61	0.00e+00	830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence