iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014829

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000883

Gene Name

LOC100840368; BRADI_4g04270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G04270	BRADI4G04270.1	BRADI4G04270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-35	121.5	272	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp+ef+CpIslelM+dPv++++G+ty+r++Iekwlasg++tcP+t+q++++++l+Pn++lr+li++wce+n++
   Q: 272  VPDEFRCPISLELMKDPVIVATGQTYERTCIEKWLASGHHTCPTTQQRMANTTLTPNYVLRSLISQWCETNGV 344
           8*********************************************************************987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAGDREEDEE GEGVALAPRP ATATERVAKA VDAATTCSTA GEYRNAYKRP LLALSRRIRL 60
LGPFAEELRE RRAPAEKEED GEEKTLAPLA DALEKALDLL RLGREGSRIS LVFERDRVMK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGCG ACCGCGAGGA GGACGAGGAG GGGGAGGGGG TGGCCCTGGC GCCGCGCCCG 60
GCCACGGCGA CGGAGCGGGT GGCCAAGGCG GTGGACGCCG CCACGACCTG CTCCACCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100840368

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	91.45	0.00e+00	1068.00
IUUC-Aly-005681	Arabidopsis lyrata	58.27	0.00e+00	691.00
IUUC-Ath-007618	Arabidopsis thaliana	58.89	0.00e+00	696.00
IUUC-Bol-015254	Brassica oleracea	58.63	0.00e+00	679.00
IUUC-Bra-017857	Brassica rapa	58.47	0.00e+00	671.00
IUUC-Hvu-047396	Hordeum vulgare	92.09	0.00e+00	901.00
IUUC-Lpe-051065	Leersia perrieri	83.99	0.00e+00	1048.00
IUUC-Mac-065565	Musa acuminata	61.90	0.00e+00	650.00
IUUC-Oba-075101	Oryza barthii	79.79	0.00e+00	1009.00
IUUC-Obr-076784	Oryza brachyantha	85.66	0.00e+00	963.00
IUUC-Ogl-077638	Oryza glaberrima	84.23	0.00e+00	1019.00
IUUC-Ogu-078222	Oryza glumaepatula	83.92	0.00e+00	1016.00
IUUC-Oin-079280	Oryza indica	85.27	0.00e+00	985.00
IUUC-Olo-080852	Oryza longistaminata	84.76	0.00e+00	981.00
IUUC-Ome-081164	Oryza meridionalis	85.40	0.00e+00	994.00
IUUC-Oni-083018	Oryza nivara	81.62	0.00e+00	1017.00
IUUC-Opu-083626	Oryza punctata	82.47	0.00e+00	1021.00
IUUC-Oru-084907	Oryza rufipogon	83.00	0.00e+00	1018.00
IUUC-Osa-085313	Oryza sativa	85.36	0.00e+00	869.00
IUUC-Ppe-102057	Prunus persica	67.16	0.00e+00	704.00
IUUC-Sit-110392	Setaria italica	83.61	0.00e+00	1012.00
IUUC-Tae-123841	Triticum aestivum	86.87	0.00e+00	1067.00
IUUC-Tur-126448	Triticum urartu	91.93	0.00e+00	1076.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence