iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006887

Ensembl Protein ID

AT1G04850.1

UniProt Accession

Q9MAT3; Q9MAT3_ARATH

Genbank Protein ID

AAF40452.1; AAL32687.1; AAM65971.1; AAN15466.1; AEE27751.1

Protein Name

F13M7.16 protein; Putative uncharacterized protein; Putative uncharacterized protein At1g04850; Putative uncharacterized protein F13M7.16; Ubiquitin-associated (UBA)/TS-N domain-containing protein

Genbank Nucleotide ID

AC004809; AY062609; AY088435; BT000147; CP002684

Gene Name

F13M7.16; At1g04850; F13M7_16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G04850	AT1G04850.1	AT1G04850.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.20e-08	33.2	111	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
            d+ +le+l++MGF++ +a +aL  + n +leaAv+++ ++
   Q: 111  VDNNILEELEAMGFPKARATRALHYSgNASLEAAVNWVVEH 151
           57889********************************9876 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL 60
HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG EAAEEMVVPD VDNNILEELE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAAGCTCC GTTTACCAAA CCGTTACTTA CGTGCCTAAT CTAAACCGAT TAAATCAATT 60
TATATCAATG TCAGAACCGG AAACAACTGA ACCGGTACTG AAAACGATTG AACCGACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018997--PUB_domain
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001103	Aegilops tauschii	62.50	2.00e-65	241.00
IUUC-Aml-002325	Ailuropoda melanoleuca	40.48	4.00e-12	64.30
IUUC-Atr-002907	Amborella trichopoda	73.38	9.00e-139	486.00
IUUC-Aly-005639	Arabidopsis lyrata	98.06	0.00e+00	721.00
IUUC-Ame-011399	Astyanax mexicanus	45.71	1.00e-12	66.20
IUUC-Bta-013151	Bos taurus	36.32	5.00e-13	67.80
IUUC-Bdi-014311	Brachypodium distachyon	71.81	1.00e-136	478.00
IUUC-Bol-016537	Brassica oleracea	90.65	0.00e+00	645.00
IUUC-Bra-017510	Brassica rapa	91.11	0.00e+00	642.00
IUUC-Cja-019084	Callithrix jacchus	50.91	4.00e-12	64.70
IUUC-Cfa-020997	Canis familiaris	49.09	2.00e-11	62.80
IUUC-Cpo-021736	Cavia porcellus	50.00	4.00e-06	44.30
IUUC-Csa-024040	Chlorocebus sabaeus	50.91	3.00e-12	64.70
IUUC-Csv-026379	Ciona savignyi	40.00	2.00e-06	46.20
IUUC-Cme-027235	Cyanidioschyzon merolae	44.07	1.00e-09	57.00
IUUC-Dno-029598	Dasypus novemcinctus	50.91	4.00e-12	64.70
IUUC-Dor-030917	Dipodomys ordii	44.16	3.00e-12	65.10
IUUC-Eca-034294	Equus caballus	52.73	3.00e-12	65.10
IUUC-Eeu-034906	Erinaceus europaeus	50.91	7.00e-12	63.90
IUUC-Fca-035653	Felis catus	41.67	1.00e-11	63.20
IUUC-Gma-042684	Glycine max	78.37	4.00e-145	507.00
IUUC-Ggo-044821	Gorilla gorilla	50.91	4.00e-12	64.70
IUUC-Hsa-046797	Homo sapiens	50.91	3.00e-12	65.10
IUUC-Hvu-047779	Hordeum vulgare	75.16	4.00e-61	227.00
IUUC-Itr-048850	Ictidomys tridecemlineatus	42.86	4.00e-12	64.70
IUUC-Lch-049508	Latimeria chalumnae	58.49	4.00e-13	68.20
IUUC-Lpe-051322	Leersia perrieri	72.97	3.00e-136	477.00
IUUC-Laf-053932	Loxodonta africana	45.45	1.00e-12	66.20
IUUC-Mcc-055300	Macaca mulatta	50.91	3.00e-12	65.10
IUUC-Mtr-058099	Medicago truncatula	76.51	8.00e-150	522.00
IUUC-Mmr-060979	Microcebus murinus	50.91	6.00e-12	63.90
IUUC-Mmu-063212	Mus musculus	50.91	4.00e-12	64.30
IUUC-Mac-065072	Musa acuminata	66.48	1.00e-63	235.00
IUUC-Mpu-066540	Mustela putorius furo	50.91	6.00e-12	63.90
IUUC-Mlu-067589	Myotis lucifugus	50.91	6.00e-12	63.90
IUUC-Nle-069045	Nomascus leucogenys	50.91	3.00e-12	64.70
IUUC-Opr-070772	Ochotona princeps	50.91	6.00e-12	63.90
IUUC-Oan-073484	Ornithorhynchus anatinus	41.67	4.00e-10	58.90
IUUC-Ocu-074333	Oryctolagus cuniculus	50.91	2.00e-12	65.50
IUUC-Oba-075451	Oryza barthii	72.60	2.00e-133	468.00
IUUC-Obr-076923	Oryza brachyantha	72.93	2.00e-128	451.00
IUUC-Ogl-077259	Oryza glaberrima	40.62	6.00e-65	240.00
IUUC-Ogu-078589	Oryza glumaepatula	72.60	3.00e-134	470.00
IUUC-Oin-079151	Oryza indica	72.36	7.00e-134	469.00
IUUC-Olo-080934	Oryza longistaminata	65.13	4.00e-112	397.00
IUUC-Ome-081253	Oryza meridionalis	71.36	2.00e-132	465.00
IUUC-Oni-082110	Oryza nivara	41.32	2.00e-62	231.00
IUUC-Opu-083336	Oryza punctata	72.84	8.00e-135	473.00
IUUC-Oru-085235	Oryza rufipogon	72.84	6.00e-135	473.00
IUUC-Osa-085611	Oryza sativa	72.84	6.00e-135	473.00
IUUC-Olu-087606	Ostreococcus lucimarinus	43.55	1.00e-26	112.00
IUUC-Oga-088429	Otolemur garnettii	50.91	4.00e-12	64.30
IUUC-Oar-089885	Ovis aries	45.88	9.00e-13	66.60
IUUC-Ptr-091315	Pan troglodytes	50.91	3.00e-12	65.10
IUUC-Pan-092885	Papio anubis	50.91	3.00e-12	64.70
IUUC-Pma-094284	Petromyzon marinus	44.83	5.00e-10	54.70
IUUC-Ppa-095484	Physcomitrella patens	67.80	7.00e-129	452.00
IUUC-Pfo-096188	Poecilia formosa	51.85	3.00e-11	61.60
IUUC-Pab-097881	Pongo abelii	50.91	4.00e-12	64.70
IUUC-Pop-099678	Populus trichocarpa	81.29	1.00e-167	581.00
IUUC-Pca-100977	Procavia capensis	55.56	7.00e-12	63.90
IUUC-Ppe-101243	Prunus persica	80.70	6.00e-119	419.00
IUUC-Pva-102169	Pteropus vampyrus	50.91	8.00e-12	63.90
IUUC-Rno-105459	Rattus norvegicus	50.91	5.00e-12	64.30
IUUC-Smo-109480	Selaginella moellendorffii	62.74	3.00e-113	400.00
IUUC-Sit-109874	Setaria italica	71.67	1.00e-133	468.00
IUUC-Sly-111766	Solanum lycopersicum	74.52	1.00e-150	525.00
IUUC-Stu-112122	Solanum tuberosum	73.57	2.00e-149	521.00
IUUC-Sbi-114220	Sorghum bicolor	71.94	5.00e-133	466.00
IUUC-Ssc-116114	Sus scrofa	50.91	6.00e-12	63.90
IUUC-Tru-117839	Takifugu rubripes	44.74	7.00e-11	60.50
IUUC-Tsy-118813	Tarsius syrichta	50.91	6.00e-12	63.90
IUUC-Tni-120504	Tetraodon nigroviridis	41.89	3.00e-11	61.60
IUUC-Tca-121495	Theobroma cacao	81.64	3.00e-164	570.00
IUUC-Tae-124350	Triticum aestivum	65.26	2.00e-67	248.00
IUUC-Tur-126615	Triticum urartu	64.89	2.00e-66	245.00
IUUC-Tbe-128034	Tupaia belangeri	41.67	3.00e-12	65.50
IUUC-Ttr-128468	Tursiops truncatus	42.86	2.00e-12	65.50
IUUC-Vvi-131064	Vitis vinifera	76.60	8.00e-82	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence