iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113770

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G181200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023040	Sb04g023040.1	Sb04g023040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.7	122	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +++dg   ++lp CgH fha+C+ +w         + +CPlCr
   Q: 122  CSVCLAELQDGeeARFLPrCGHGFHAECVDMW------LASHTTCPLCR 164
           9*******55545777777*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTTTTTSQHQ GPPTAAPVGD AAGSAMTPGG SITVASSIVI FVIISIGLLS LQYCFDARDR 60
ETHHGAWSRR RRRRGDDADG TAGSNNGATR TRGVDPEVMR ALPVTVYRAA AAPASKEDAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACGA CGACGACGTC CCAGCACCAA GGACCTCCCA CGGCGGCGCC AGTGGGGGAC 60
GCCGCGGGTA GCGCCATGAC GCCCGGCGGC TCCATCACCG TGGCCAGTTC TATCGTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g023040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mdo-062651	Monodelphis domestica	41.46	9.00e-13	68.20
IUUC-Oba-075677	Oryza barthii	66.10	1.00e-26	111.00
IUUC-Opu-083718	Oryza punctata	61.48	2.00e-34	137.00
IUUC-Olu-087692	Ostreococcus lucimarinus	42.35	7.00e-12	63.20
IUUC-Pno-094907	Phaeosphaeria nodorum	50.00	2.00e-11	62.80
IUUC-Pop-098962	Populus trichocarpa	45.30	2.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence