iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113846

UUCD1 version

UUC-SoB-00142

Ensembl Protein ID

Sb01g013190.1

UniProt Accession

A0A1B6QJ24; A0A1B6QJ24_SORBI

Genbank Protein ID

KXG37921.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G151800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g013190	Sb01g013190.1	Sb01g013190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.6	131	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl....qkw..pglknssskefrCPl 44
           C+iCl+ +++ p+ l+CgH+f+++C       +  ++  +s+ +e++CP+
   Q: 131  CPICLDTLFN-PYALSCGHLFCKSCAcgaaS-VyiFQGVKSAPPEAKCPV 178
           **********.**************544432.145666699********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKFGATYEEY LRAEQDKFLG QCSHVEYKRL KKCFIDDQQI MVQEGRMLLN YVTMNAIAIR 60
KILKKYDKSP WLIELGAFHL NCDDSDADEP GAGGFFKNGF FKNFSCDLSG AQPLLTMTIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTTCG GCGCCACATA TGAGGAGTAT CTCCGGGCAG AGCAGGACAA ATTCCTAGGA 60
CAATGCTCCC ATGTAGAATA TAAACGCCTC AAGAAGGTAT TGAAGAAATG TCGAGTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000827	Aegilops tauschii	73.48	3.00e-88	317.00
IUUC-Bdi-014689	Brachypodium distachyon	72.65	3.00e-86	310.00
IUUC-Lpe-051499	Leersia perrieri	73.91	2.00e-89	321.00
IUUC-Mvi-060296	Microbotryum violaceum	58.33	1.00e-04	41.20
IUUC-Mac-065655	Musa acuminata	58.70	1.00e-73	269.00
IUUC-Oba-075404	Oryza barthii	74.35	5.00e-89	320.00
IUUC-Obr-076671	Oryza brachyantha	70.00	9.00e-89	319.00
IUUC-Ogl-076954	Oryza glaberrima	74.35	5.00e-89	320.00
IUUC-Ogu-078560	Oryza glumaepatula	74.78	2.00e-89	322.00
IUUC-Oin-079323	Oryza indica	74.78	9.00e-90	322.00
IUUC-Olo-081014	Oryza longistaminata	74.78	1.00e-89	322.00
IUUC-Oni-082375	Oryza nivara	74.78	2.00e-89	322.00
IUUC-Oru-085144	Oryza rufipogon	74.78	3.00e-89	321.00
IUUC-Osa-085862	Oryza sativa	74.78	9.00e-90	322.00
IUUC-Pma-094122	Petromyzon marinus	57.58	1.00e-05	41.60
IUUC-Sit-110739	Setaria italica	80.87	1.00e-91	328.00
IUUC-Tru-118273	Takifugu rubripes	65.38	6.00e-06	44.70
IUUC-Tni-120768	Tetraodon nigroviridis	65.38	2.00e-06	45.80
IUUC-Tae-124832	Triticum aestivum	73.48	3.00e-88	317.00
IUUC-Tur-126362	Triticum urartu	72.61	3.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence