iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005785

Ensembl Protein ID

fgenesh2_kg.4__300__AT2G23780.1

UniProt Accession

D7LG24; D7LG24_ARALL

Genbank Protein ID

EFH56785.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_481240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__300__AT2G23780.1	fgenesh2_kg.4__300__AT2G23780.1	fgenesh2_kg.4__300__AT2G23780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-06	28.9	25	80
E3 activity/RING/RING	1.00e-06	29.8	28	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ +   ++ +wl +  +  +cPv+++ +++++lvP 
   Q: 25   DFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHsqECPVCKAVVQDDKLVPL 80
           699*****************************65555579**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e  +d p+v+ CgH+f+  Cl++w +++   s ++ CP+C+
   Q: 28   CNICFELAQD-PIVTLCGHLFCWPCLYRW-LHH--HSHSQECPVCK 69
           99********.999***************.555..788899****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVNGESSTST SYSDNNNGAN DQGGDFECNI CFELAQDPIV TLCGHLFCWP CLYRWLHHHS 60
HSQECPVCKA VVQDDKLVPL YGRGKNQTDP RSKRYPGLRI PNRPTGQRPE TAAPPPQAEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAACTTTCT TTCCCAACAG TAAGACTCTG TTTTTTTCCC CACAATGTCT GGTTTCCTCT 60
TTTGTTTCGT CCAAATCTTT ATATGTTTTT GTGCTGATTA AAACCCTCGA CTTTGATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_481240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007401	Arabidopsis thaliana	90.31	9.00e-91	325.00
IUUC-Bol-016132	Brassica oleracea	82.67	3.00e-100	356.00
IUUC-Bra-017631	Brassica rapa	80.62	7.00e-100	355.00
IUUC-Cme-027164	Cyanidioschyzon merolae	53.85	5.00e-20	90.90
IUUC-Dor-030170	Dipodomys ordii	42.45	4.00e-25	106.00
IUUC-Gga-040514	Gallus gallus	57.53	5.00e-23	100.00
IUUC-Gma-043248	Glycine max	64.36	2.00e-72	264.00
IUUC-Lpe-050836	Leersia perrieri	67.11	4.00e-56	212.00
IUUC-Meu-055984	Macropus eugenii	52.56	2.00e-20	90.90
IUUC-Mtr-058107	Medicago truncatula	60.98	2.00e-63	234.00
IUUC-Mga-059554	Meleagris gallopavo	57.53	5.00e-23	100.00
IUUC-Mdo-062437	Monodelphis domestica	54.26	3.00e-26	110.00
IUUC-Oba-075461	Oryza barthii	50.86	3.00e-51	194.00
IUUC-Ogu-078727	Oryza glumaepatula	50.65	1.00e-50	192.00
IUUC-Oni-082738	Oryza nivara	67.11	1.00e-52	199.00
IUUC-Oru-084914	Oryza rufipogon	50.86	3.00e-51	194.00
IUUC-Oga-088197	Otolemur garnettii	55.42	2.00e-24	104.00
IUUC-Ppa-095474	Physcomitrella patens	54.14	1.00e-48	185.00
IUUC-Pop-098988	Populus trichocarpa	61.26	7.00e-66	242.00
IUUC-Ppe-102011	Prunus persica	60.53	2.00e-73	267.00
IUUC-Pva-102249	Pteropus vampyrus	41.73	3.00e-26	110.00
IUUC-Sit-109934	Setaria italica	66.00	1.00e-50	192.00
IUUC-Sar-113669	Sorex araneus	56.52	2.00e-11	59.30
IUUC-Tsy-119615	Tarsius syrichta	37.74	5.00e-26	108.00
IUUC-Tca-121830	Theobroma cacao	70.48	3.00e-82	296.00
IUUC-Xtr-132608	Xenopus tropicalis	57.97	4.00e-23	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence