iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099572

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_765468; POPTR_0008s05830g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s05830	POPTR_0008s05830.1	POPTR_0008s05830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.4	199	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f  + + + +pC+H++h+dC+  w       s + +CP+Cr
   Q: 199  CAVCKEAFelESEAREMPCKHIYHTDCILPW------LSIRNSCPVCR 240
           ******9977555999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPTTPSFW CYGCSRFVQV WRQDSLTCAE CESGFIEEIE NPPHVIQTEI SSDRHRRFSP 60
AAGTMFMIGN RSNPHNRNRR GGGAGSGDRS PMNPVILLRG GAGGAADDVV GDDGGRGGGG 120

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Nucleotide Sequence
(Fasta)

TTTAAAATAA AAACCCCAAA TTTTCCCTTC AATTTTCTCT CCAACCAAAC ACCAAAAAGC 60
TTTAATCTTT CACCAGATCT GATCCAAAAT AAGTTTTGGA TTTGTTTGAA TTTGATGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s05830g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047236	Hordeum vulgare	60.36	1.00e-58	219.00
IUUC-Oba-075840	Oryza barthii	59.91	3.00e-59	221.00
IUUC-Obr-076496	Oryza brachyantha	60.81	6.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence