iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058409

Ensembl Protein ID

AET01943

UniProt Accession

G7L9W6; G7L9W6_MEDTR

Genbank Protein ID

AET01943.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g023400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g023400	AET01943	AET01943

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	33.5	117	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d    ++ +++lp C+H fh+dC+ +w       + + +CPlCr
   Q: 117  CAVCLCDVvegEK-TRLLPkCNHGFHLDCIDMW------FQSHSTCPLCR 159
           ********77544.99999**************......9999******8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGAIAAATAT NGSSDALGDS NRIEITGKIM VLAIIFLFMV VMFVLMLHLY AKWFWWRFEE 60
RTVPQPRNRR RRRRFVFAPG QDPVVYGSHQ IGLEAKILKS LPVLVFKNED FKDGLECAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAGCCATC ACCTTCTTCC CTCTTCTGTC ATACAAGTCC AAGTCTTGAG TCCAAACTTC 60
AGCTTCAACA TTCTTCTTCT TAATTCCTTC CACAACTTCC TCTTTATCTA CCAACAAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g023400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000301	Aegilops tauschii	38.17	1.00e-19	88.60
IUUC-Atr-003085	Amborella trichopoda	48.00	7.00e-33	133.00
IUUC-Aly-005421	Arabidopsis lyrata	43.89	7.00e-49	186.00
IUUC-Ath-006957	Arabidopsis thaliana	43.71	4.00e-48	184.00
IUUC-Bol-015888	Brassica oleracea	48.21	4.00e-41	161.00
IUUC-Bra-016720	Brassica rapa	47.53	4.00e-40	157.00
IUUC-Gma-043714	Glycine max	62.96	6.00e-79	286.00
IUUC-Hvu-047333	Hordeum vulgare	41.18	9.00e-26	109.00
IUUC-Lpe-051092	Leersia perrieri	43.07	6.00e-21	94.00
IUUC-Mac-065123	Musa acuminata	40.95	6.00e-35	140.00
IUUC-Oba-074984	Oryza barthii	43.93	2.00e-23	102.00
IUUC-Ogl-077250	Oryza glaberrima	43.93	3.00e-23	102.00
IUUC-Ogu-078929	Oryza glumaepatula	43.93	2.00e-23	102.00
IUUC-Oin-079559	Oryza indica	43.93	2.00e-23	102.00
IUUC-Oru-084427	Oryza rufipogon	43.93	2.00e-23	102.00
IUUC-Osa-086236	Oryza sativa	43.93	3.00e-23	102.00
IUUC-Pop-099883	Populus trichocarpa	59.79	4.00e-51	194.00
IUUC-Ppe-101738	Prunus persica	67.35	9.00e-47	179.00
IUUC-Sit-109688	Setaria italica	36.13	6.00e-15	73.90
IUUC-Sly-110862	Solanum lycopersicum	45.51	4.00e-41	160.00
IUUC-Stu-112429	Solanum tuberosum	52.00	6.00e-42	163.00
IUUC-Sbi-114427	Sorghum bicolor	46.51	4.00e-28	118.00
IUUC-Tca-121232	Theobroma cacao	60.66	3.00e-55	207.00
IUUC-Tur-126264	Triticum urartu	39.47	2.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence