iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080901

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540553.1_FG002	KN540553.1_FGT002	KN540553.1_FGP002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-20	71.5	218	294

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ f Cp+++++M dPv+++sG+tydr++Ie+++++         cPvt+ +++++ l  n  l+++i +w+ +n+
   Q: 218  LYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADgsepvVCPVTKMSMQSKALRSNVPLKSTIAEWIMRNE 294
           5799*******************************666666679****************************99886 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAGAVRSGAQ ARKASLVESI EAAISELMPP EAAADAEHEN FMDVGSHLYH APLATMELQR 60
VQNSTVNVMH VMEYLAANVD LAKDLVMRCS AVARELKNDD LLGMTEDLDS VIKNIGHELS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGG CGGTGGTGGA GGAGGGGAGA ATGCTACCCC GGTCGTAGCG TCTCCGTCCT 60
CTCAGCCACG GGAGGAGGAG GAGGAGCTTG GAGTGGAAGG TGAGGAGGAG AAGCAGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014572	Brachypodium distachyon	80.22	0.00e+00	1253.00
IUUC-Hvu-047800	Hordeum vulgare	78.81	0.00e+00	1284.00
IUUC-Lpe-050817	Leersia perrieri	93.45	0.00e+00	1565.00
IUUC-Oba-075004	Oryza barthii	98.36	0.00e+00	1662.00
IUUC-Obr-076090	Oryza brachyantha	94.52	0.00e+00	1515.00
IUUC-Ogl-077375	Oryza glaberrima	98.36	0.00e+00	1662.00
IUUC-Ogu-078488	Oryza glumaepatula	98.71	0.00e+00	1668.00
IUUC-Oin-079369	Oryza indica	98.84	0.00e+00	1510.00
IUUC-Ome-081243	Oryza meridionalis	98.24	0.00e+00	1664.00
IUUC-Oni-082268	Oryza nivara	98.36	0.00e+00	1665.00
IUUC-Opu-083388	Oryza punctata	96.84	0.00e+00	1637.00
IUUC-Oru-084387	Oryza rufipogon	98.36	0.00e+00	1663.00
IUUC-Osa-086255	Oryza sativa	98.88	0.00e+00	1575.00
IUUC-Sit-110322	Setaria italica	80.95	0.00e+00	1303.00
IUUC-Sbi-113818	Sorghum bicolor	79.21	0.00e+00	1217.00
IUUC-Tae-123677	Triticum aestivum	78.70	0.00e+00	1262.00
IUUC-Tur-126161	Triticum urartu	78.75	0.00e+00	1239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence