iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099123

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Armadillo/beta-catenin repeat family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTR_0010s14630g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s14630	POPTR_0010s14630.1	POPTR_0010s14630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-22	79.5	184	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++e f Cp+++++M dPv+++sG tydr++I kwl+++++     cP+t+++l ++ l  n +l+ +i++w e+n++
   Q: 184  MYETFFCPLTKQIMDDPVTIQSGETYDRKAITKWLEESENsqeiFCPITGKKLLSRVLRTNVALKTTIEEWKERNEV 260
           5799*******************************776666778*****************************9976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

LSKDSTAMAS VAESLLTSIS EIIESVTCIE QEKESFAEIG CYLYRVFPVI MELQTTEHTP 60
KNAMVILQSL SRSITEAKDL VNKCQRGTNS NFDSELKSTI SLLERVIEDM GECLSSIPSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGCAAAG ATTCAACTGC TATGGCTAGT GTTGCTGAAT CCTTGCTGAC ATCAATTTCA 60
GAGATCATTG AATCTGTAAC TTGCATAGAA CAAGAAAAGG AAAGCTTTGC TGAAATTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0010s14630g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002664	Amborella trichopoda	45.17	0.00e+00	795.00
IUUC-Aca-005155	Anolis carolinensis	38.57	2.00e-09	55.10
IUUC-Ath-006596	Arabidopsis thaliana	55.89	0.00e+00	889.00
IUUC-Bdi-014572	Brachypodium distachyon	43.62	0.00e+00	744.00
IUUC-Hvu-047800	Hordeum vulgare	42.96	0.00e+00	734.00
IUUC-Lpe-050817	Leersia perrieri	41.19	0.00e+00	745.00
IUUC-Mac-065538	Musa acuminata	46.80	0.00e+00	778.00
IUUC-Oba-075004	Oryza barthii	40.69	0.00e+00	748.00
IUUC-Ogl-077375	Oryza glaberrima	40.69	0.00e+00	748.00
IUUC-Ogu-078488	Oryza glumaepatula	40.78	0.00e+00	754.00
IUUC-Olo-080998	Oryza longistaminata	40.90	0.00e+00	687.00
IUUC-Ome-081243	Oryza meridionalis	40.76	0.00e+00	747.00
IUUC-Oni-082268	Oryza nivara	40.69	0.00e+00	754.00
IUUC-Opu-083388	Oryza punctata	41.83	0.00e+00	779.00
IUUC-Oru-084387	Oryza rufipogon	40.69	0.00e+00	753.00
IUUC-Ppe-101776	Prunus persica	62.77	0.00e+00	1170.00
IUUC-Sit-110322	Setaria italica	42.69	0.00e+00	729.00
IUUC-Sbi-113818	Sorghum bicolor	41.48	0.00e+00	700.00
IUUC-Tca-121365	Theobroma cacao	65.07	0.00e+00	1279.00
IUUC-Tae-124087	Triticum aestivum	42.73	0.00e+00	719.00
IUUC-Tur-126161	Triticum urartu	43.10	0.00e+00	713.00
IUUC-Vvi-131502	Vitis vinifera	68.69	0.00e+00	1078.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence