iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110322

Ensembl Protein ID

Si005763m

UniProt Accession

K3XV06; K3XV06_SETIT

Genbank Protein ID

KQL10302.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003531

Gene Name

LOC101771084; SETIT_005763mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si005763m.g	Si005763m	Si005763m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-18	67.0	216	292

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ f Cp+++++M dPv+++s +tydr++Ie ++++         cPvt++ +++++l  n+ l+++i +w+ +n+
   Q: 216  LYDSFFCPLTNKVMVDPVTTESSVTYDRRAIEDYFEKFTDssepvICPVTKTAMQSKTLRSNIPLKSTIAEWIMRNE 292
           5799*******************************7766667789***************************99886 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MQRSEAQARK ASLAESVLAA ISELMSSAAA IDVEQENFMD VDSHLHHTAA PGTMELQKAQ 60
HSPTNTLHVM EYLAANVDLA KDLVAKCSAA AQRLMDDDLL GITEDLDNVI KNISNELSRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTCTGCGA GCTGCGCGGT CTCCCACCAT TATCCCTCGC CTCTCGCCGG TCTCCGCCCT 60
TTCTACCTCG GCTGTCCCGT TGCGTGCGGT GCTGTTCTTG GGCGACGAGG GCGCCATGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101771084

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002664	Amborella trichopoda	42.02	0.00e+00	662.00
IUUC-Ath-006596	Arabidopsis thaliana	43.69	0.00e+00	631.00
IUUC-Bdi-014572	Brachypodium distachyon	81.67	0.00e+00	1531.00
IUUC-Bol-016179	Brassica oleracea	44.87	0.00e+00	656.00
IUUC-Bra-017617	Brassica rapa	44.38	0.00e+00	649.00
IUUC-Hvu-047800	Hordeum vulgare	79.88	0.00e+00	1530.00
IUUC-Lpe-050817	Leersia perrieri	79.96	0.00e+00	1583.00
IUUC-Mac-065538	Musa acuminata	48.19	0.00e+00	782.00
IUUC-Oba-075004	Oryza barthii	81.03	0.00e+00	1592.00
IUUC-Obr-076090	Oryza brachyantha	82.12	0.00e+00	1288.00
IUUC-Ogl-077375	Oryza glaberrima	81.03	0.00e+00	1592.00
IUUC-Ogu-078488	Oryza glumaepatula	81.41	0.00e+00	1601.00
IUUC-Oin-079369	Oryza indica	81.99	0.00e+00	1494.00
IUUC-Olo-080901	Oryza longistaminata	80.95	0.00e+00	1357.00
IUUC-Ome-081243	Oryza meridionalis	80.45	0.00e+00	1591.00
IUUC-Oni-082268	Oryza nivara	80.97	0.00e+00	1596.00
IUUC-Opu-083388	Oryza punctata	81.73	0.00e+00	1644.00
IUUC-Oru-084387	Oryza rufipogon	81.03	0.00e+00	1598.00
IUUC-Osa-086255	Oryza sativa	81.78	0.00e+00	1546.00
IUUC-Pop-099123	Populus trichocarpa	42.35	0.00e+00	733.00
IUUC-Ppe-101776	Prunus persica	43.76	0.00e+00	748.00
IUUC-Sly-111047	Solanum lycopersicum	41.77	0.00e+00	754.00
IUUC-Stu-112113	Solanum tuberosum	41.35	0.00e+00	720.00
IUUC-Sbi-113818	Sorghum bicolor	85.90	0.00e+00	1611.00
IUUC-Tca-121365	Theobroma cacao	46.95	0.00e+00	840.00
IUUC-Tae-123677	Triticum aestivum	79.59	0.00e+00	1505.00
IUUC-Tur-126161	Triticum urartu	79.22	0.00e+00	1483.00
IUUC-Vvi-131502	Vitis vinifera	47.65	0.00e+00	701.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence