iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087076

Ensembl Protein ID

ENSORLP00000014356.1

UniProt Accession

H2M7A3; H2M7A3_ORYLA

Genbank Protein ID

ENSORLP00000014356

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04050069

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000011456.1	ENSORLT00000014357.1	ENSORLP00000014356.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-18	66.6	278	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C vCg+g++++  l+ C+ C++ +H  Cl ++  +e+p+ + w CpkC +
   Q: 278  FCMVCGRGDKED-RLLLCDGCDDSYHTFCLIPP-LQEVPKGD-WRCPKCVA 325
           7*********88.5*******************.*******7.******75 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAEIVEFVPP PECPVFEPSW EEFSDPLGFI NKIRPIAEKT GICKIRPPQD WQPPFACDVR 60
NFRFTPRVQR LNELEAITRV KLNFLDQIAK FWELQGSRIR FPHVERKILD LYQLSKIVSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGA TTGTCGAATT TGTTCCTCCT CCTGAATGCC CGGTGTTTGA GCCGAGTTGG 60
GAGGAATTCT CGGATCCTTT AGGATTTATC AACAAAATCA GACCCATTGC AGAGAAAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	75.00	0.00e+00	2130.00
IUUC-Atr-002595	Amborella trichopoda	35.72	3.00e-120	427.00
IUUC-Apl-004141	Anas platyrhynchos	74.71	0.00e+00	2127.00
IUUC-Aca-004952	Anolis carolinensis	73.72	0.00e+00	2153.00
IUUC-Aly-006097	Arabidopsis lyrata	63.64	2.00e-09	59.30
IUUC-Ath-007218	Arabidopsis thaliana	63.64	3.00e-09	58.90
IUUC-Acl-008162	Aspergillus clavatus	29.81	1.00e-120	428.00
IUUC-Ani-009139	Aspergillus nidulans	29.58	7.00e-116	412.00
IUUC-Ate-010453	Aspergillus terreus	29.81	3.00e-113	403.00
IUUC-Ame-011323	Astyanax mexicanus	88.37	0.00e+00	2176.00
IUUC-Bgr-012241	Blumeria graminis	31.14	6.00e-118	419.00
IUUC-Bta-012902	Bos taurus	74.65	0.00e+00	2145.00
IUUC-Bdi-014050	Brachypodium distachyon	30.31	1.00e-118	422.00
IUUC-Cja-018988	Callithrix jacchus	74.06	0.00e+00	1971.00
IUUC-Cfa-020212	Canis familiaris	74.26	0.00e+00	2102.00
IUUC-Cpo-022221	Cavia porcellus	76.50	0.00e+00	1476.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	50.00	2.00e-08	49.70
IUUC-Csa-023575	Chlorocebus sabaeus	75.14	0.00e+00	2154.00
IUUC-Cho-024280	Choloepus hoffmanni	71.01	0.00e+00	1939.00
IUUC-Cin-025321	Ciona intestinalis	47.31	0.00e+00	1047.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	29.08	4.00e-110	393.00
IUUC-Dre-027909	Danio rerio	80.39	0.00e+00	1773.00
IUUC-Dno-029473	Dasypus novemcinctus	74.61	0.00e+00	2016.00
IUUC-Dse-031479	Dothistroma septosporum	29.05	2.00e-118	421.00
IUUC-Dme-032021	Drosophila melanogaster	47.09	0.00e+00	1111.00
IUUC-Eca-034265	Equus caballus	74.31	0.00e+00	2123.00
IUUC-Fca-035476	Felis catus	74.98	0.00e+00	2132.00
IUUC-Fal-037078	Ficedula albicollis	74.59	0.00e+00	2021.00
IUUC-Fso-038127	Fusarium solani	29.28	1.00e-109	392.00
IUUC-Gga-040466	Gallus gallus	74.72	0.00e+00	2203.00
IUUC-Gac-042566	Gasterosteus aculeatus	88.92	0.00e+00	2611.00
IUUC-Gma-042675	Glycine max	29.48	4.00e-110	393.00
IUUC-Ggo-044524	Gorilla gorilla	74.32	0.00e+00	1775.00
IUUC-Hsa-045821	Homo sapiens	75.20	0.00e+00	2141.00
IUUC-Kpa-049245	Komagataella pastoris	22.41	7.00e-30	126.00
IUUC-Lch-050630	Latimeria chalumnae	69.74	0.00e+00	1987.00
IUUC-Lpe-051537	Leersia perrieri	43.78	2.00e-87	318.00
IUUC-Loc-051963	Lepisosteus oculatus	81.25	0.00e+00	2231.00
IUUC-Laf-053918	Loxodonta africana	69.45	0.00e+00	1891.00
IUUC-Mcc-055672	Macaca mulatta	75.20	0.00e+00	2153.00
IUUC-Mor-057198	Magnaporthe oryzae	30.22	1.00e-118	421.00
IUUC-Mtr-058113	Medicago truncatula	31.04	1.00e-94	342.00
IUUC-Mga-059192	Meleagris gallopavo	66.32	0.00e+00	1802.00
IUUC-Mmr-060968	Microcebus murinus	75.14	0.00e+00	2147.00
IUUC-Mdo-062945	Monodelphis domestica	75.00	0.00e+00	2142.00
IUUC-Mmu-063614	Mus musculus	74.02	0.00e+00	2125.00
IUUC-Mpu-066349	Mustela putorius furo	75.00	0.00e+00	2132.00
IUUC-Mlu-067363	Myotis lucifugus	75.27	0.00e+00	2175.00
IUUC-Ncr-068763	Neurospora crassa	29.36	1.00e-113	405.00
IUUC-Nle-070142	Nomascus leucogenys	75.14	0.00e+00	2146.00
IUUC-Opr-071002	Ochotona princeps	65.35	0.00e+00	1862.00
IUUC-Ont-072471	Oreochromis niloticus	90.06	0.00e+00	2427.00
IUUC-Oan-072797	Ornithorhynchus anatinus	66.91	0.00e+00	1702.00
IUUC-Ocu-074164	Oryctolagus cuniculus	74.56	0.00e+00	2147.00
IUUC-Oba-075388	Oryza barthii	32.97	4.00e-84	306.00
IUUC-Obr-076296	Oryza brachyantha	32.67	3.00e-94	341.00
IUUC-Ogu-079040	Oryza glumaepatula	31.52	3.00e-84	307.00
IUUC-Ome-081764	Oryza meridionalis	35.48	7.00e-101	362.00
IUUC-Oni-083012	Oryza nivara	32.97	4.00e-84	306.00
IUUC-Opu-083164	Oryza punctata	28.09	2.00e-88	321.00
IUUC-Oru-084630	Oryza rufipogon	33.08	1.00e-83	305.00
IUUC-Oga-088350	Otolemur garnettii	73.38	0.00e+00	2066.00
IUUC-Oar-090045	Ovis aries	74.78	0.00e+00	2151.00
IUUC-Ptr-091199	Pan troglodytes	75.52	0.00e+00	2141.00
IUUC-Pan-092094	Papio anubis	74.06	0.00e+00	2120.00
IUUC-Psi-093550	Pelodiscus sinensis	75.48	0.00e+00	2122.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.97	4.00e-116	413.00
IUUC-Pfo-097266	Poecilia formosa	90.08	0.00e+00	2409.00
IUUC-Pab-098576	Pongo abelii	75.14	0.00e+00	2140.00
IUUC-Ppe-101504	Prunus persica	41.61	1.00e-96	348.00
IUUC-Pva-103109	Pteropus vampyrus	70.10	0.00e+00	1997.00
IUUC-Pte-104195	Pyrenophora teres	29.90	1.00e-122	435.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.77	4.00e-123	436.00
IUUC-Rno-105664	Rattus norvegicus	74.09	0.00e+00	2125.00
IUUC-Sce-106207	Saccharomyces cerevisiae	35.29	3.00e-74	273.00
IUUC-Sha-107506	Sarcophilus harrisii	75.69	0.00e+00	1894.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	21.15	3.00e-35	144.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.29	4.00e-55	210.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	29.71	1.00e-117	418.00
IUUC-Smo-108843	Selaginella moellendorffii	57.45	6.00e-12	66.20
IUUC-Sit-110534	Setaria italica	35.12	6.00e-117	416.00
IUUC-Sly-111298	Solanum lycopersicum	42.44	5.00e-101	363.00
IUUC-Sar-113052	Sorex araneus	74.19	0.00e+00	2120.00
IUUC-Tgu-116613	Taeniopygia guttata	74.70	0.00e+00	2150.00
IUUC-Tru-118604	Takifugu rubripes	86.49	0.00e+00	2678.00
IUUC-Tsy-119237	Tarsius syrichta	70.38	0.00e+00	1820.00
IUUC-Tni-120779	Tetraodon nigroviridis	84.40	0.00e+00	2646.00
IUUC-Tre-122213	Trichoderma reesei	29.87	2.00e-115	410.00
IUUC-Tvi-122263	Trichoderma virens	30.23	2.00e-110	394.00
IUUC-Tae-125894	Triticum aestivum	36.25	1.00e-107	385.00
IUUC-Tme-127087	Tuber melanosporum	30.33	2.00e-127	451.00
IUUC-Ttr-129242	Tursiops truncatus	73.92	0.00e+00	2100.00
IUUC-Uma-129590	Ustilago maydis	30.21	5.00e-129	456.00
IUUC-Vvi-131071	Vitis vinifera	31.29	5.00e-82	299.00
IUUC-Xtr-131762	Xenopus tropicalis	75.82	0.00e+00	1809.00
IUUC-Xma-133693	Xiphophorus maculatus	89.54	0.00e+00	2424.00
IUUC-Zma-135829	Zea mays	33.83	1.00e-112	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence