iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095451

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545005

Gene Name

PHYPADRAFT_135034

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S116_111V6	PP1S116_111V6.1	PP1S116_111V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.5	269	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C +C+ ++++g   l lpC+H++h +C+q+w       + +  CP+C
   Q: 269  CVVCRLEYEKGdkMLRLPCKHHYHSECIQQW------LQHNKVCPVC 309
           99**777744444777***************......99******** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSNADKEST EASKMEGKEG GAASNMSNDN EKPQQVEGLG SDAENNVVSD DSPAPEPSTA 60
GRVPFTSLSQ VDSDMALARA LQEQERAYFL LQMGHGGGDF NDSGRFFYEG NHFDIPGDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGGTCCG TCTCTTATTT CCAATCCCGT ATCTCCTCTC CTCGGTCGCC CGTCCTTGCA 60
AATAAGCAAT TCGCGGTGCT GGGCCTGTAA GCTAGGGTTC CAGCGCCTCG GCAGACGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_135034

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000406	Aegilops tauschii	54.05	3.00e-40	157.00
IUUC-Atr-002551	Amborella trichopoda	53.94	7.00e-44	169.00
IUUC-Aly-005825	Arabidopsis lyrata	40.81	2.00e-50	191.00
IUUC-Ath-007389	Arabidopsis thaliana	45.09	4.00e-48	184.00
IUUC-Bdi-014369	Brachypodium distachyon	57.41	8.00e-49	186.00
IUUC-Bol-015622	Brassica oleracea	43.84	2.00e-48	185.00
IUUC-Bra-017639	Brassica rapa	44.16	4.00e-49	187.00
IUUC-Cre-022675	Chlamydomonas reinhardtii	37.24	1.00e-19	88.60
IUUC-Cin-025552	Ciona intestinalis	38.68	8.00e-18	82.00
IUUC-Gma-043972	Glycine max	43.84	2.00e-45	175.00
IUUC-Hvu-047198	Hordeum vulgare	55.41	5.00e-46	177.00
IUUC-Lpe-051230	Leersia perrieri	46.67	2.00e-31	129.00
IUUC-Mtr-058625	Medicago truncatula	47.33	2.00e-31	129.00
IUUC-Mac-065545	Musa acuminata	53.62	2.00e-40	158.00
IUUC-Oba-075053	Oryza barthii	52.12	3.00e-39	154.00
IUUC-Obr-076920	Oryza brachyantha	47.06	1.00e-52	199.00
IUUC-Ogl-077780	Oryza glaberrima	52.12	3.00e-39	154.00
IUUC-Ogu-078317	Oryza glumaepatula	50.29	1.00e-38	152.00
IUUC-Oin-079849	Oryza indica	53.09	1.00e-39	155.00
IUUC-Olo-080905	Oryza longistaminata	46.88	2.00e-26	113.00
IUUC-Ome-081728	Oryza meridionalis	53.75	7.00e-40	157.00
IUUC-Oni-082691	Oryza nivara	48.59	6.00e-32	130.00
IUUC-Opu-083391	Oryza punctata	53.57	1.00e-43	169.00
IUUC-Oru-085011	Oryza rufipogon	51.50	5.00e-39	154.00
IUUC-Osa-086147	Oryza sativa	51.50	5.00e-39	154.00
IUUC-Pop-098888	Populus trichocarpa	50.94	1.00e-42	166.00
IUUC-Ppe-102055	Prunus persica	56.33	2.00e-46	178.00
IUUC-Ptt-103733	Puccinia triticina	45.28	2.00e-11	62.80
IUUC-Smo-108692	Selaginella moellendorffii	58.70	9.00e-29	117.00
IUUC-Sit-110594	Setaria italica	54.78	4.00e-44	171.00
IUUC-Sly-111293	Solanum lycopersicum	44.72	2.00e-26	111.00
IUUC-Stu-112116	Solanum tuberosum	45.53	5.00e-27	113.00
IUUC-Sbi-113812	Sorghum bicolor	48.13	2.00e-51	195.00
IUUC-Tca-121858	Theobroma cacao	55.56	8.00e-40	157.00
IUUC-Tae-125531	Triticum aestivum	55.97	2.00e-46	178.00
IUUC-Tur-126249	Triticum urartu	55.62	1.00e-45	175.00
IUUC-Vvi-131462	Vitis vinifera	41.58	3.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence