iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131422

UUCD1 version

UUC-ViV-00384

Ensembl Protein ID

VIT_12s0028g01570.t01

UniProt Accession

E0CTW4; E0CTW4_VITVI

Genbank Protein ID

CBI22030.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g01570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g01570	VIT_12s0028g01570.t01	VIT_12s0028g01570.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-12	46.7	160	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCledf  ++++l++pC+H+fh+dC+  w       +++ +CP+Cr
   Q: 160  CAICLEDFepREQVLLTPCNHMFHEDCIVPW------VKNHGQCPVCR 201
           ********88556******************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSRGTNNLTR MLGNQQTRPD YSARLPWYLS HEATSDANYL VHDPWSPLEE RLLLSLAGFP 60
RQPPPLQILV LDDEIARELN RRPREPLTAI AGPWTRQASP YQEQSKLTQD EQKVALQKLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAATTTCA TCTCCTTCAA AGAGAAAGGA ATACCAACTA TAAAACTCAG TAGCCCAAAG 60
CTGCCATTGT TCCTCATTGC CAAGGAGTTG ACTTACAGAG ATCAGAAGAA AAGAAAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

vvi:100853556

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005601	Arabidopsis lyrata	47.37	5.00e-26	110.00
IUUC-Ath-007601	Arabidopsis thaliana	51.40	9.00e-27	113.00
IUUC-Bol-015476	Brassica oleracea	49.55	1.00e-27	115.00
IUUC-Bra-016846	Brassica rapa	50.00	4.00e-28	117.00
IUUC-Gma-043742	Glycine max	40.00	9.00e-36	142.00
IUUC-Mtr-057929	Medicago truncatula	52.68	1.00e-32	132.00
IUUC-Oba-075788	Oryza barthii	45.05	2.00e-22	98.60
IUUC-Obr-076331	Oryza brachyantha	42.98	1.00e-22	99.00
IUUC-Ogl-077650	Oryza glaberrima	37.04	6.00e-23	99.80
IUUC-Ogu-077952	Oryza glumaepatula	44.14	4.00e-22	97.40
IUUC-Oin-079751	Oryza indica	45.05	1.00e-22	98.60
IUUC-Olo-081017	Oryza longistaminata	44.83	2.00e-22	99.80
IUUC-Ome-081103	Oryza meridionalis	44.04	5.00e-22	97.40
IUUC-Oni-082573	Oryza nivara	45.05	1.00e-22	98.60
IUUC-Opu-083625	Oryza punctata	45.87	1.00e-21	95.50
IUUC-Oru-084894	Oryza rufipogon	45.05	1.00e-22	98.60
IUUC-Osa-086183	Oryza sativa	45.05	1.00e-22	98.60
IUUC-Pop-098997	Populus trichocarpa	51.65	2.00e-48	184.00
IUUC-Ppe-102043	Prunus persica	50.00	2.00e-36	144.00
IUUC-Sit-110291	Setaria italica	35.18	8.00e-23	99.80
IUUC-Sly-110877	Solanum lycopersicum	46.77	1.00e-40	158.00
IUUC-Stu-112701	Solanum tuberosum	46.39	1.00e-42	165.00
IUUC-Sbi-113836	Sorghum bicolor	42.24	6.00e-23	99.80
IUUC-Tca-121325	Theobroma cacao	47.03	5.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence