iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099354

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_258295; POPTR_0017s07650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s07650	POPTR_0017s07650.1	POPTR_0017s07650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.4	93	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh  C+  w       + + +CPlCr
   Q: 93   CSVCLNEFqdDETLRLLPkCSHAFHIPCIDTW------LRSHTNCPLCR 135
           ********7644499999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIVLSAIALV LACCVIYVKF IRKRRRRSSS QQEDDEEEQR IETRDQLVDQ DQGPVVDHPI 60
WYIRTVGLQP SVISSITVCK YKSGDGLVEG TECSVCLNEF QDDETLRLLP KCSHAFHIPC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAAGAGAAA GGAAAACGCG AAAACTCTAT TCTCCACTTC GCTACTTTGT CAAATCAAGG 60
CAGCTGCAAG GAACATTCAA CTTGTCCCTC GTAGCTTTCA TCCTCTCTCT TCCAAGCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0017s07650g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006089	Arabidopsis lyrata	69.70	8.00e-41	160.00
IUUC-Ath-007027	Arabidopsis thaliana	70.41	1.00e-40	159.00
IUUC-Bdi-014119	Brachypodium distachyon	64.56	5.00e-28	117.00
IUUC-Bol-015952	Brassica oleracea	48.66	2.00e-45	175.00
IUUC-Bra-017907	Brassica rapa	48.68	3.00e-42	165.00
IUUC-Gma-042767	Glycine max	46.98	2.00e-55	209.00
IUUC-Hvu-047104	Hordeum vulgare	40.66	4.00e-28	117.00
IUUC-Lpe-051048	Leersia perrieri	63.41	2.00e-31	129.00
IUUC-Mtr-058706	Medicago truncatula	42.57	4.00e-50	191.00
IUUC-Oba-075496	Oryza barthii	59.30	1.00e-29	123.00
IUUC-Obr-076636	Oryza brachyantha	40.49	5.00e-31	127.00
IUUC-Ogl-077828	Oryza glaberrima	59.30	1.00e-29	123.00
IUUC-Ogu-078954	Oryza glumaepatula	59.30	2.00e-29	122.00
IUUC-Oin-080127	Oryza indica	59.30	1.00e-29	123.00
IUUC-Ome-081996	Oryza meridionalis	59.30	1.00e-29	123.00
IUUC-Oni-082344	Oryza nivara	59.30	2.00e-29	123.00
IUUC-Opu-083515	Oryza punctata	59.30	1.00e-29	122.00
IUUC-Oru-084771	Oryza rufipogon	59.30	9.00e-30	124.00
IUUC-Sit-110541	Setaria italica	32.17	4.00e-31	128.00
IUUC-Stu-112066	Solanum tuberosum	52.46	9.00e-50	190.00
IUUC-Tca-121350	Theobroma cacao	53.59	7.00e-82	296.00
IUUC-Vvi-130931	Vitis vinifera	53.59	1.00e-51	196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence