iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014459

UUCD1 version

UUC-BrD-01411

Ensembl Protein ID

BRADI1G04226.1

UniProt Accession

I1GLR1; I1GLR1_BRADI

Genbank Protein ID

KQK12519.1; KQK12520.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880; CM000880

Gene Name

LOC100821902; BRADI_1g04226

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G04226	BRADI1G04226.1	BRADI1G04226.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-07	30.4	276	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H ++vt++af  + +l+++++ D +ik+WDlr+
   Q: 276  HHGPVTAVAFdRGgHLMATAGVDRKIKIWDLRK 308
           8899******9666899*************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGISTEEDPK ERKNNKDSLD EMEMKVAKYS RGKAANLGAL RDKKLKGQLA GKERLIGQSA 60
KAAAQAEKWF LPIEGGYLEP EGLEKTYRYQ QQSIVQEVDL LSSRKPFDMI LPVLGPYTLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTATCT CTACCGAAGA GGACCCCAAG GAGAGAAAGA ACAACAAAGA CTCTTTGGAC 60
GAGATGGAGA TGAAGGTGGC CAAGTATTCG CGGGGAAAGG CTGCTAACTT GGGGGTAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

bdi:100821902

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002528	Amborella trichopoda	65.95	3.00e-174	603.00
IUUC-Ang-009764	Aspergillus niger	42.82	5.00e-97	347.00
IUUC-Cel-018465	Caenorhabditis elegans	42.97	1.00e-86	313.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	45.99	9.00e-128	449.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	45.22	1.00e-102	366.00
IUUC-Cne-026784	Cryptococcus neoformans	36.21	1.00e-67	249.00
IUUC-Dse-031280	Dothistroma septosporum	39.81	1.00e-96	346.00
IUUC-Eeu-034982	Erinaceus europaeus	43.91	5.00e-50	191.00
IUUC-Fox-037980	Fusarium oxysporum	40.29	4.00e-96	344.00
IUUC-Fso-038154	Fusarium solani	44.50	2.00e-99	355.00
IUUC-Gmo-039548	Gadus morhua	42.93	4.00e-85	308.00
IUUC-Ggr-039976	Gaeumannomyces graminis	39.18	3.00e-96	345.00
IUUC-Kpa-049329	Komagataella pastoris	45.80	9.00e-94	336.00
IUUC-Lpe-051501	Leersia perrieri	81.85	0.00e+00	778.00
IUUC-Loc-051736	Lepisosteus oculatus	46.24	7.00e-88	317.00
IUUC-Meu-056419	Macropus eugenii	45.33	2.00e-79	289.00
IUUC-Mor-057146	Magnaporthe oryzae	39.17	5.00e-94	337.00
IUUC-Mpo-057512	Magnaporthe poae	43.10	4.00e-97	347.00
IUUC-Mtr-058139	Medicago truncatula	59.18	0.00e+00	626.00
IUUC-Mla-059028	Melampsora laricipopulina	40.27	5.00e-82	297.00
IUUC-Mvi-060533	Microbotryum violaceum	41.78	3.00e-85	308.00
IUUC-Ont-071977	Oreochromis niloticus	43.15	1.00e-86	312.00
IUUC-Oba-075525	Oryza barthii	83.17	0.00e+00	820.00
IUUC-Obr-076468	Oryza brachyantha	83.79	0.00e+00	811.00
IUUC-Ogl-077395	Oryza glaberrima	83.17	0.00e+00	820.00
IUUC-Ogu-078730	Oryza glumaepatula	82.79	0.00e+00	818.00
IUUC-Oin-079797	Oryza indica	83.17	0.00e+00	820.00
IUUC-Olo-080539	Oryza longistaminata	82.49	0.00e+00	810.00
IUUC-Oni-082635	Oryza nivara	82.98	0.00e+00	817.00
IUUC-Opu-083733	Oryza punctata	83.75	0.00e+00	833.00
IUUC-Oru-084560	Oryza rufipogon	83.17	0.00e+00	820.00
IUUC-Osa-085463	Oryza sativa	83.17	0.00e+00	820.00
IUUC-Olu-087881	Ostreococcus lucimarinus	44.68	1.00e-105	376.00
IUUC-Pma-094742	Petromyzon marinus	40.47	2.00e-85	308.00
IUUC-Ppa-095230	Physcomitrella patens	50.70	2.00e-142	498.00
IUUC-Pop-099756	Populus trichocarpa	63.21	7.00e-174	602.00
IUUC-Pte-104146	Pyrenophora teres	41.12	1.00e-88	319.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	41.76	1.00e-88	320.00
IUUC-Sce-106227	Saccharomyces cerevisiae	41.29	2.00e-99	355.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	47.86	3.00e-103	368.00
IUUC-Spo-108359	Schizosaccharomyces pombe	45.77	2.00e-101	361.00
IUUC-Smo-108706	Selaginella moellendorffii	54.93	4.00e-132	464.00
IUUC-Sly-111569	Solanum lycopersicum	65.56	6.00e-171	593.00
IUUC-Stu-112403	Solanum tuberosum	64.44	3.00e-171	594.00
IUUC-Sbi-114817	Sorghum bicolor	81.61	0.00e+00	731.00
IUUC-Sre-115150	Sporisorium reilianum	42.42	9.00e-89	320.00
IUUC-Tru-118535	Takifugu rubripes	43.68	1.00e-90	327.00
IUUC-Tre-122114	Trichoderma reesei	46.78	3.00e-105	374.00
IUUC-Tvi-122437	Trichoderma virens	45.58	6.00e-102	363.00
IUUC-Tme-127208	Tuber melanosporum	45.03	1.00e-105	375.00
IUUC-Ttr-129047	Tursiops truncatus	43.75	1.00e-88	319.00
IUUC-Uma-129320	Ustilago maydis	42.89	1.00e-89	323.00
IUUC-Vda-129926	Verticillium dahliae	43.57	1.00e-101	363.00
IUUC-Yli-134674	Yarrowia lipolytica	42.82	1.00e-93	336.00
IUUC-Zma-135903	Zea mays	82.52	0.00e+00	705.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence