iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G48340	BRADI2G48340.1	BRADI2G48340.1
BRADI2G48340	BRADI2G48340.2	BRADI2G48340.2
BRADI2G48340	BRADI2G48340.6	BRADI2G48340.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	32.9	192	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     d + vlpCgH++h++Cl+ +     ++  +f+CPlC
   Q: 192  CPICFEYLfestND-VSVLPCGHTIHENCLKEM-----EEHCQFSCPLC 234
           ******99666444.999************888.....6999******* PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGAMDVQLES VAKLNVEVLA QGSLLFDGNH TAQKINGFNT DDRERFEKGS MKYGCAHYRR 60
RCRIRAPCCN EIFDCRHCHN EAKNSIGIDT MRRHEIPRHE VQQQVICSLC GTEQEVRQIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACCACAA AAAAGACCTC TCGCAGCTTT CGTCCCGTCC GAAGTCCCTC CGCCCATTCC 60
CAATTCCCAA ATCCACAGCC GCATTCAAGG ATTCAGCCTC GATTCGATCG GCGAACGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	63.22	4.00e-107	380.00
IUUC-Atr-003010	Amborella trichopoda	65.99	2.00e-116	411.00
IUUC-Aly-005866	Arabidopsis lyrata	74.90	3.00e-105	374.00
IUUC-Ath-006644	Arabidopsis thaliana	71.10	9.00e-105	372.00
IUUC-Bol-016218	Brassica oleracea	73.52	7.00e-112	395.00
IUUC-Bra-017289	Brassica rapa	72.33	2.00e-109	387.00
IUUC-Gma-043631	Glycine max	67.87	4.00e-118	416.00
IUUC-Hvu-047668	Hordeum vulgare	85.48	4.00e-139	486.00
IUUC-Mtr-058223	Medicago truncatula	68.70	2.00e-108	384.00
IUUC-Mac-064690	Musa acuminata	75.29	2.00e-102	364.00
IUUC-Oba-075768	Oryza barthii	82.18	5.00e-147	513.00
IUUC-Obr-076899	Oryza brachyantha	81.52	4.00e-136	476.00
IUUC-Ogu-078233	Oryza glumaepatula	82.18	1.00e-146	512.00
IUUC-Oin-079289	Oryza indica	79.41	1.00e-139	488.00
IUUC-Olo-080423	Oryza longistaminata	67.20	4.00e-113	400.00
IUUC-Ome-081323	Oryza meridionalis	82.51	8.00e-148	515.00
IUUC-Oni-082322	Oryza nivara	82.18	2.00e-147	514.00
IUUC-Opu-083185	Oryza punctata	83.50	7.00e-141	492.00
IUUC-Oru-085111	Oryza rufipogon	80.26	1.00e-144	504.00
IUUC-Osa-085701	Oryza sativa	82.18	5.00e-147	512.00
IUUC-Pop-099379	Populus trichocarpa	74.81	2.00e-118	417.00
IUUC-Sit-110262	Setaria italica	84.49	1.00e-142	498.00
IUUC-Sly-111522	Solanum lycopersicum	72.55	1.00e-112	398.00
IUUC-Stu-112734	Solanum tuberosum	73.33	2.00e-113	401.00
IUUC-Sbi-113837	Sorghum bicolor	83.17	8.00e-143	498.00
IUUC-Tca-121091	Theobroma cacao	75.00	2.00e-107	380.00
IUUC-Tae-125789	Triticum aestivum	86.07	4.00e-144	503.00
IUUC-Tur-126465	Triticum urartu	85.15	4.00e-148	516.00
IUUC-Vvi-131084	Vitis vinifera	77.82	4.00e-114	403.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence