iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014341

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100841748; BRADI_3g56960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G56960	BRADI3G56960.1	BRADI3G56960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-31	108.5	267	339

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslel rdPv++++G+ty+r+ I++w++ g++tcP+t+q+l++ +l+Pn++lr+li +wcee+++
   Q: 267  MPEDFRCPISLELIRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQQKLQNLTLTPNYVLRSLILQWCEEKGI 339
           69*******************************************************************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MATAEAAAAA EIVREIAAVA AADLAAAAEP LRADCLRLAR KVSLLSHLVA EIAEPGEGGA 60
RDAEAAVAWV GELVRALQAA RRFVALGRAP ALAAGASDQD VIYNNITVQF KYVTWQLQAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGG CCGAGGCGGC GGCGGCGGCG GAGATCGTGC GGGAGATCGC GGCGGTGGCC 60
GCCGCCGACC TGGCCGCCGC CGCCGAGCCG CTGCGGGCCG ACTGCCTCCG CCTCGCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100841748

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	88.21	0.00e+00	941.00
IUUC-Aly-005733	Arabidopsis lyrata	51.95	2.00e-147	515.00
IUUC-Ath-007555	Arabidopsis thaliana	51.60	1.00e-153	536.00
IUUC-Bol-015936	Brassica oleracea	51.31	2.00e-160	558.00
IUUC-Bra-017682	Brassica rapa	50.90	1.00e-154	539.00
IUUC-Gma-044210	Glycine max	54.25	2.00e-174	604.00
IUUC-Hvu-047676	Hordeum vulgare	95.73	0.00e+00	678.00
IUUC-Lpe-051513	Leersia perrieri	83.06	0.00e+00	972.00
IUUC-Mtr-058156	Medicago truncatula	53.96	3.00e-166	577.00
IUUC-Mac-065650	Musa acuminata	52.90	4.00e-172	597.00
IUUC-Oba-075045	Oryza barthii	81.27	0.00e+00	971.00
IUUC-Obr-076820	Oryza brachyantha	86.06	0.00e+00	771.00
IUUC-Ogl-077779	Oryza glaberrima	82.57	0.00e+00	983.00
IUUC-Ogu-078572	Oryza glumaepatula	82.41	0.00e+00	983.00
IUUC-Oin-079487	Oryza indica	82.25	0.00e+00	981.00
IUUC-Olo-080348	Oryza longistaminata	83.09	0.00e+00	907.00
IUUC-Ome-081282	Oryza meridionalis	82.41	0.00e+00	974.00
IUUC-Oni-083061	Oryza nivara	82.25	0.00e+00	981.00
IUUC-Opu-083297	Oryza punctata	82.74	0.00e+00	949.00
IUUC-Oru-084442	Oryza rufipogon	82.41	0.00e+00	983.00
IUUC-Osa-085919	Oryza sativa	82.41	0.00e+00	983.00
IUUC-Pop-099907	Populus trichocarpa	52.24	2.00e-169	588.00
IUUC-Ppe-101146	Prunus persica	52.45	6.00e-160	556.00
IUUC-Sit-110422	Setaria italica	82.66	0.00e+00	926.00
IUUC-Sly-111534	Solanum lycopersicum	51.59	2.00e-158	551.00
IUUC-Stu-112138	Solanum tuberosum	52.61	9.00e-161	559.00
IUUC-Sbi-114533	Sorghum bicolor	82.01	0.00e+00	911.00
IUUC-Tca-121496	Theobroma cacao	53.77	1.00e-172	598.00
IUUC-Tae-125409	Triticum aestivum	85.50	0.00e+00	930.00
IUUC-Tur-126634	Triticum urartu	86.14	0.00e+00	909.00
IUUC-Vvi-131185	Vitis vinifera	52.90	7.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence