iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043730

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000853

Gene Name

LOC100811123; GLYMA_20G013200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G01640	GLYMA20G01640.1	GLYMA20G01640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-33	115.0	272	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+flCpIslelMrdPv++++G+ty+rs+I++w++ g++tcP+t+q+l++ +l+Pn++lr+li++wc e+++
   Q: 272  IPEDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNTTCPKTQQKLQHLTLTPNYVLRSLISQWCIEHNI 344
           8*******************************************************************99976 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAGEELAGDH TPELLCLVHD IAGMCSALSS SAGSAGAMFR KDCTDLVRRI SLLTHLFEEI 60
KELSNNVVGG SSSSPSPSSS ASSKWSSDLV LALHSARRLL SVARNFRSNC SSDGAAKTIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCTCGCAA GCACCAACAC AAGACATTAT TATTACAGCG ATTTACAGTA TTTATTTATT 60
TTTGTACGTG TCGACACTTG ATAAGTCTCT TCACACAAAC ACCTTATTAG ACTCTCTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100811123

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005733	Arabidopsis lyrata	64.45	0.00e+00	682.00
IUUC-Ath-007555	Arabidopsis thaliana	61.25	0.00e+00	695.00
IUUC-Bol-015936	Brassica oleracea	62.05	0.00e+00	718.00
IUUC-Bra-016825	Brassica rapa	62.87	0.00e+00	723.00
IUUC-Lpe-051513	Leersia perrieri	53.99	8.00e-172	597.00
IUUC-Oba-075045	Oryza barthii	54.33	1.00e-171	596.00
IUUC-Ogl-077779	Oryza glaberrima	54.96	1.00e-173	602.00
IUUC-Ogu-078572	Oryza glumaepatula	54.96	7.00e-174	603.00
IUUC-Oin-079487	Oryza indica	54.80	4.00e-173	601.00
IUUC-Ome-081282	Oryza meridionalis	54.72	5.00e-172	597.00
IUUC-Oni-083061	Oryza nivara	54.80	4.00e-173	601.00
IUUC-Opu-083297	Oryza punctata	54.96	1.00e-163	570.00
IUUC-Oru-084442	Oryza rufipogon	54.96	1.00e-173	602.00
IUUC-Osa-085919	Oryza sativa	54.96	1.00e-173	602.00
IUUC-Sbi-114533	Sorghum bicolor	58.33	5.00e-166	577.00
IUUC-Vvi-131185	Vitis vinifera	70.60	0.00e+00	837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence