iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099907

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_658791; POPTR_0010s12410g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s12410	POPTR_0010s12410.1	POPTR_0010s12410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-33	115.9	260	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++flCpIslelMrdPv++++G+ty+rs++++w+++g++tcP+t+q+l++ +l+Pn++lr+li +wc+e+++
   Q: 260  KIPDDFLCPISLELMRDPVIVATGQTYERSYMQRWIDTGNSTCPKTQQKLEHLTLTPNYVLRSLITQWCAEHKV 333
           59*********************************************************************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAGGEESLVT SVFLLDLVRQ ICVVGTSGAG DKNNNNNVFR KDCMDLVRRV SLLTHFLEEI 60
SGQLGSLNAL GSCSSSSKEI NWSSDLVAAL QSAKNLLSLA GIFQSTNDSD SAATKIATLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACACAAA GAAAATGATA ATCACAAAAG CTAAAACAAG ACAGTGCTTC TCGTTGCGAC 60
TGTTTTTATT GAAATCAAAT TCATAATATT CCACATCCAA CGCCACCCCC AGCCTTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0010s12410g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005917	Arabidopsis lyrata	62.09	0.00e+00	738.00
IUUC-Ath-006760	Arabidopsis thaliana	62.09	0.00e+00	739.00
IUUC-Bdi-014341	Brachypodium distachyon	52.56	4.00e-168	583.00
IUUC-Bol-015936	Brassica oleracea	62.11	0.00e+00	719.00
IUUC-Bra-016825	Brassica rapa	62.54	0.00e+00	727.00
IUUC-Gma-044210	Glycine max	69.08	0.00e+00	811.00
IUUC-Lpe-051513	Leersia perrieri	53.14	2.00e-167	581.00
IUUC-Ncr-068835	Neurospora crassa	29.17	2.00e-17	83.60
IUUC-Oba-075045	Oryza barthii	52.17	4.00e-166	577.00
IUUC-Obr-076820	Oryza brachyantha	67.09	1.00e-151	529.00
IUUC-Ogl-077779	Oryza glaberrima	52.98	5.00e-169	587.00
IUUC-Ogu-078572	Oryza glumaepatula	52.82	3.00e-169	587.00
IUUC-Oin-079487	Oryza indica	52.66	2.00e-168	585.00
IUUC-Olo-080348	Oryza longistaminata	55.94	2.00e-162	565.00
IUUC-Ome-081282	Oryza meridionalis	52.82	8.00e-168	583.00
IUUC-Oni-083061	Oryza nivara	52.66	2.00e-168	585.00
IUUC-Opu-083297	Oryza punctata	52.98	5.00e-160	557.00
IUUC-Oru-084442	Oryza rufipogon	52.82	5.00e-169	587.00
IUUC-Osa-085919	Oryza sativa	52.82	5.00e-169	587.00
IUUC-Ppe-101146	Prunus persica	66.82	0.00e+00	775.00
IUUC-Ptt-103922	Puccinia triticina	26.79	6.00e-10	57.80
IUUC-Sit-110422	Setaria italica	52.08	7.00e-161	560.00
IUUC-Sbi-114533	Sorghum bicolor	57.07	1.00e-163	569.00
IUUC-Ssc-116061	Sus scrofa	28.96	3.00e-11	64.70
IUUC-Tca-121496	Theobroma cacao	69.83	0.00e+00	843.00
IUUC-Tae-125409	Triticum aestivum	55.25	4.00e-149	521.00
IUUC-Tur-126634	Triticum urartu	54.35	5.00e-144	503.00
IUUC-Tbe-127244	Tupaia belangeri	31.84	1.00e-10	61.60
IUUC-Ttr-128612	Tursiops truncatus	26.05	4.00e-11	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence