iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114790

Ensembl Protein ID

Sb01g041800.1

UniProt Accession

C5WRN8; C5WRN8_SORBI

Genbank Protein ID

EER92591.1; EER96363.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760; CM000761

Gene Name

SORBI_001G444800; SORBI_002G135200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g041800	Sb01g041800.1	Sb01g041800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.70e-41	141.2	1	76
ULD/UDP/UBQ/UBQ_PIM	4.30e-28	97.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGIIEP SLQALARKYN QDKMICRKCY ARLHPRAVNC RKKKCGHSNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATCACAG GAGCCCCCCA GCCCCGAGAA CATCCAGGTT CAACAAGATG CAGATCTTCG 60
TGAAGACCCT GACTGGGAAG ACCATCACCC TCGAGGTGGA GAGCAGCGAC ACCATCGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001975--Ribosomal_L40e
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

sbi:SORBI_01g041800; sbi:SORBI_02g012040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001246	Ailuropoda melanoleuca	91.41	2.00e-66	243.00
IUUC-Atr-003081	Amborella trichopoda	78.29	6.00e-49	184.00
IUUC-Apl-004069	Anas platyrhynchos	90.36	8.00e-41	156.00
IUUC-Ath-007098	Arabidopsis thaliana	97.66	1.00e-70	256.00
IUUC-Ago-007932	Ashbya gossypii	89.84	3.00e-65	239.00
IUUC-Acl-008350	Aspergillus clavatus	84.21	1.00e-61	227.00
IUUC-Afl-008554	Aspergillus flavus	90.62	1.00e-65	240.00
IUUC-Afu-008984	Aspergillus fumigatus	90.62	6.00e-65	238.00
IUUC-Ang-009609	Aspergillus niger	89.84	9.00e-65	237.00
IUUC-Aor-009991	Aspergillus oryzae	88.98	2.00e-63	233.00
IUUC-Ate-010252	Aspergillus terreus	90.40	8.00e-64	236.00
IUUC-Ame-010785	Astyanax mexicanus	88.42	2.00e-47	179.00
IUUC-Bgr-012115	Blumeria graminis	88.89	3.00e-63	232.00
IUUC-Bta-013360	Bos taurus	91.41	2.00e-66	243.00
IUUC-Bci-013851	Botrytis cinerea	90.62	5.00e-66	241.00
IUUC-Bdi-014499	Brachypodium distachyon	98.45	5.00e-72	261.00
IUUC-Bol-015961	Brassica oleracea	98.44	3.00e-71	258.00
IUUC-Cel-018677	Caenorhabditis elegans	89.06	6.00e-64	234.00
IUUC-Cja-019572	Callithrix jacchus	91.41	2.00e-66	243.00
IUUC-Cfa-020339	Canis familiaris	91.41	2.00e-66	243.00
IUUC-Cpo-021534	Cavia porcellus	91.41	2.00e-66	243.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	94.53	5.00e-69	251.00
IUUC-Csa-023398	Chlorocebus sabaeus	91.41	2.00e-66	243.00
IUUC-Cin-025266	Ciona intestinalis	88.28	3.00e-64	235.00
IUUC-Csv-026105	Ciona savignyi	88.19	5.00e-64	235.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	90.40	1.00e-62	233.00
IUUC-Cne-026913	Cryptococcus neoformans	88.28	4.00e-64	235.00
IUUC-Cme-027344	Cyanidioschyzon merolae	92.22	4.00e-45	172.00
IUUC-Dre-028761	Danio rerio	90.62	8.00e-66	241.00
IUUC-Dno-028899	Dasypus novemcinctus	91.41	5.00e-66	241.00
IUUC-Dme-031588	Drosophila melanogaster	90.62	9.00e-66	240.00
IUUC-Ete-033120	Echinops telfairi	91.41	2.00e-66	243.00
IUUC-Eca-033787	Equus caballus	91.41	2.00e-66	243.00
IUUC-Eeu-035081	Erinaceus europaeus	94.29	1.00e-33	132.00
IUUC-Fca-035725	Felis catus	91.41	2.00e-66	243.00
IUUC-Fox-037870	Fusarium oxysporum	90.62	5.00e-66	241.00
IUUC-Fso-038461	Fusarium solani	96.25	1.00e-41	159.00
IUUC-Gmo-039163	Gadus morhua	91.41	2.00e-66	242.00
IUUC-Ggr-040034	Gaeumannomyces graminis	90.62	4.00e-66	242.00
IUUC-Gga-040909	Gallus gallus	91.41	3.00e-66	242.00
IUUC-Gac-041640	Gasterosteus aculeatus	91.41	3.00e-66	242.00
IUUC-Gma-043254	Glycine max	98.44	1.00e-71	260.00
IUUC-Ggo-045411	Gorilla gorilla	91.41	2.00e-66	243.00
IUUC-Hsa-046609	Homo sapiens	72.26	4.00e-51	192.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	91.41	9.00e-67	245.00
IUUC-Kpa-049279	Komagataella pastoris	89.84	3.00e-65	239.00
IUUC-Lch-049971	Latimeria chalumnae	91.41	4.00e-66	243.00
IUUC-Loc-052117	Lepisosteus oculatus	91.41	2.00e-66	243.00
IUUC-Lma-053049	Leptosphaeria maculans	92.97	3.00e-67	245.00
IUUC-Laf-054284	Loxodonta africana	91.41	1.00e-66	245.00
IUUC-Mcc-055710	Macaca mulatta	90.00	4.00e-65	239.00
IUUC-Meu-056411	Macropus eugenii	91.41	2.00e-66	243.00
IUUC-Mor-057008	Magnaporthe oryzae	90.62	1.00e-65	240.00
IUUC-Mpo-057360	Magnaporthe poae	90.62	7.00e-66	241.00
IUUC-Mtr-058437	Medicago truncatula	97.66	2.00e-70	256.00
IUUC-Mla-059080	Melampsora laricipopulina	90.29	3.00e-50	189.00
IUUC-Mmr-061335	Microcebus murinus	85.94	6.00e-60	221.00
IUUC-Mdo-062752	Monodelphis domestica	91.41	2.00e-66	243.00
IUUC-Mmu-063548	Mus musculus	91.41	1.00e-66	245.00
IUUC-Mac-064915	Musa acuminata	97.66	9.00e-71	257.00
IUUC-Mpu-066513	Mustela putorius furo	91.41	2.00e-66	243.00
IUUC-Mlu-068010	Myotis lucifugus	89.06	8.00e-65	237.00
IUUC-Nfi-068358	Neosartorya fischeri	90.48	5.00e-64	234.00
IUUC-Ncr-068799	Neurospora crassa	90.62	1.00e-65	240.00
IUUC-Opr-070655	Ochotona princeps	91.41	2.00e-66	243.00
IUUC-Ont-072180	Oreochromis niloticus	92.06	1.00e-65	240.00
IUUC-Oan-073196	Ornithorhynchus anatinus	91.41	2.00e-66	243.00
IUUC-Oba-075092	Oryza barthii	99.22	2.00e-72	263.00
IUUC-Obr-076156	Oryza brachyantha	99.22	9.00e-73	264.00
IUUC-Ogl-077471	Oryza glaberrima	99.22	2.00e-72	263.00
IUUC-Ogu-078259	Oryza glumaepatula	99.22	2.00e-72	263.00
IUUC-Oin-079901	Oryza indica	99.22	2.00e-72	263.00
IUUC-Ome-081343	Oryza meridionalis	99.22	2.00e-72	263.00
IUUC-Oru-085252	Oryza rufipogon	99.22	2.00e-72	263.00
IUUC-Ola-086333	Oryzias latipes	90.62	5.00e-66	241.00
IUUC-Olu-087819	Ostreococcus lucimarinus	85.16	3.00e-62	229.00
IUUC-Oga-088027	Otolemur garnettii	91.41	2.00e-66	243.00
IUUC-Oar-090419	Ovis aries	91.41	2.00e-66	243.00
IUUC-Ptr-091593	Pan troglodytes	91.41	2.00e-66	243.00
IUUC-Pan-091806	Papio anubis	89.06	1.00e-64	237.00
IUUC-Psi-093654	Pelodiscus sinensis	91.41	2.00e-66	243.00
IUUC-Ppa-095174	Physcomitrella patens	96.88	3.00e-70	255.00
IUUC-Pfo-096492	Poecilia formosa	91.41	3.00e-66	242.00
IUUC-Pab-098004	Pongo abelii	91.41	2.00e-66	243.00
IUUC-Pop-098929	Populus trichocarpa	97.66	9.00e-71	257.00
IUUC-Ppe-101497	Prunus persica	97.66	4.00e-71	258.00
IUUC-Pva-102945	Pteropus vampyrus	91.41	2.00e-66	243.00
IUUC-Pgr-103268	Puccinia graminis	89.84	9.00e-66	241.00
IUUC-Ptt-103804	Puccinia triticina	93.07	2.00e-52	196.00
IUUC-Pte-104101	Pyrenophora teres	91.41	1.00e-66	244.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	91.41	3.00e-66	242.00
IUUC-Rno-105290	Rattus norvegicus	91.41	2.00e-66	243.00
IUUC-Sce-106249	Saccharomyces cerevisiae	89.84	2.00e-65	239.00
IUUC-Sha-106570	Sarcophilus harrisii	91.41	2.00e-66	243.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	91.41	3.00e-66	242.00
IUUC-Spo-108045	Schizosaccharomyces pombe	90.62	2.00e-65	239.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	91.41	3.00e-66	242.00
IUUC-Sit-110085	Setaria italica	96.03	4.00e-70	256.00
IUUC-Sly-111884	Solanum lycopersicum	97.66	9.00e-71	257.00
IUUC-Stu-112385	Solanum tuberosum	94.49	9.00e-68	247.00
IUUC-Sar-112942	Sorex araneus	89.84	2.00e-65	239.00
IUUC-Sre-114908	Sporisorium reilianum	90.62	7.00e-65	238.00
IUUC-Ssc-116417	Sus scrofa	91.41	2.00e-66	243.00
IUUC-Tru-117557	Takifugu rubripes	91.41	2.00e-66	242.00
IUUC-Tni-119715	Tetraodon nigroviridis	91.41	2.00e-66	242.00
IUUC-Tca-121404	Theobroma cacao	98.44	3.00e-71	259.00
IUUC-Tvi-122611	Trichoderma virens	89.06	2.00e-65	239.00
IUUC-Tae-123019	Triticum aestivum	80.38	3.00e-67	246.00
IUUC-Tur-126527	Triticum urartu	98.45	5.00e-72	261.00
IUUC-Tme-127138	Tuber melanosporum	91.20	7.00e-65	238.00
IUUC-Ttr-128939	Tursiops truncatus	91.41	2.00e-66	243.00
IUUC-Uma-129619	Ustilago maydis	90.62	7.00e-65	238.00
IUUC-Vda-129775	Verticillium dahliae	88.89	2.00e-63	233.00
IUUC-Vvi-131414	Vitis vinifera	98.44	3.00e-71	258.00
IUUC-Xtr-131921	Xenopus tropicalis	91.41	2.00e-66	243.00
IUUC-Xma-134071	Xiphophorus maculatus	91.41	3.00e-66	242.00
IUUC-Yli-134671	Yarrowia lipolytica	90.62	2.00e-65	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence