iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d047941	Zm00001d047941_T002	Zm00001d047941_T002
Zm00001d047941	Zm00001d047941_T001	Zm00001d047941_T001
Zm00001d047941	Zm00001d047941_T003	Zm00001d047941_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	8.30e-08	33.3	324	341
UBD/Alpha-Helix/UIM	5.9e-05	14.8	223	238
UBD/Alpha-Helix/UIM	0.00013	13.7	289	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEeees 20
           d++L+lAl++S q++++s
   Q: 324  DPDLALALQMSVQDANMS 341
           89************9986 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEee 18
           d+eL+lAl+lS++Ee+
   Q: 223  DPELALALRLSMEEER 238
           89************97 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlq 15
           d+d++Lq+Ala+S++
   Q: 289  DDDDLLQQALAMSME 303
           79***********98 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVLEATMICI DNSEWMRNGD YAPSRFQAQA DAVNLICGAK TQSNPENTVG VMTMAGKGVR 60
VLVTPTSDLG KILACMHGLE VGAEANLAAA IQVAQLALKH RQNKRQQQRI IAFIGSPVKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGCGTCTA GGAGAGAGAG CTCACCTGAG CCTTTCCCAA GTTGTTTCTC TTCTCTTGCT 60
CCGCAAACCA GCGCAAGCCC TTCCCTGACA GCGGCGGCGA CATGGTGCTC GAGGTACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0647--Proteasome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003881	Anas platyrhynchos	48.42	3.00e-50	190.00
IUUC-Aca-004397	Anolis carolinensis	50.85	3.00e-59	221.00
IUUC-Ago-007858	Ashbya gossypii	49.15	2.00e-56	212.00
IUUC-Bgr-012200	Blumeria graminis	54.44	1.00e-65	242.00
IUUC-Bci-013904	Botrytis cinerea	50.77	1.00e-58	219.00
IUUC-Cel-018187	Caenorhabditis elegans	40.66	5.00e-42	164.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	59.59	2.00e-65	241.00
IUUC-Cin-025469	Ciona intestinalis	47.03	6.00e-49	187.00
IUUC-Csv-026297	Ciona savignyi	45.76	5.00e-54	204.00
IUUC-Cne-027027	Cryptococcus neoformans	44.72	5.00e-62	230.00
IUUC-Fox-037746	Fusarium oxysporum	49.37	5.00e-55	207.00
IUUC-Kpa-049158	Komagataella pastoris	51.34	8.00e-56	209.00
IUUC-Loc-052437	Lepisosteus oculatus	44.75	3.00e-32	133.00
IUUC-Mla-059105	Melampsora laricipopulina	47.06	7.00e-26	110.00
IUUC-Ncr-068760	Neurospora crassa	51.69	4.00e-60	224.00
IUUC-Oba-075955	Oryza barthii	84.89	8.00e-119	419.00
IUUC-Ogl-077252	Oryza glaberrima	84.34	4.00e-116	410.00
IUUC-Ogu-078986	Oryza glumaepatula	84.62	2.00e-114	405.00
IUUC-Oni-082397	Oryza nivara	84.89	1.00e-118	419.00
IUUC-Oru-085199	Oryza rufipogon	84.89	1.00e-118	419.00
IUUC-Osa-085911	Oryza sativa	84.89	1.00e-118	419.00
IUUC-Pno-094807	Phaeosphaeria nodorum	48.85	5.00e-60	223.00
IUUC-Pca-100722	Procavia capensis	48.23	1.00e-25	110.00
IUUC-Pte-104114	Pyrenophora teres	48.70	9.00e-51	192.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	50.21	1.00e-54	206.00
IUUC-Sce-106427	Saccharomyces cerevisiae	48.52	2.00e-57	215.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	50.72	4.00e-55	207.00
IUUC-Spo-108378	Schizosaccharomyces pombe	49.78	5.00e-57	213.00
IUUC-Sar-113015	Sorex araneus	49.70	5.00e-44	171.00
IUUC-Sre-114891	Sporisorium reilianum	55.98	7.00e-65	240.00
IUUC-Tre-122168	Trichoderma reesei	50.62	1.00e-61	228.00
IUUC-Tvi-122655	Trichoderma virens	51.05	5.00e-54	203.00
IUUC-Tme-126937	Tuber melanosporum	58.09	4.00e-70	257.00
IUUC-Uma-129436	Ustilago maydis	55.98	2.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence