iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022982

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496118

Gene Name

CHLREDRAFT_144486

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_144486	EDP05413	EDP05413

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	30.7	328	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+   dg  + +lpC H+fh  C++ w    + +  +++CPlC+
   Q: 328  CSVCLDQVGDGqmVTTLPCLHQFHSACINPW---LRHKGLHASCPLCK 372
           ********88877888***************...5559*********7 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MDLEQGQWQR PRRARTSSTG ANGANGATHA GHAALLSVPP MLGRLILGTC IAFLILGVLP 60
ASFVFWLCLM LLAFTCLRIR LQAQQLQQAL EQTQEEQAVE RLAGPLAAGG RLQLGGGGGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCTTCGA GTCTAGGAAT TGCCACCACT TGCTTTACAG CAGCAGTTTC GAGCTGAAGT 60
TTCGACAAAC TGTCTTATGA TATTGCGTTT GCGTTTGGTC TAGAGCATCG AACAACTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

cre:CHLREDRAFT_144486

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002996	Amborella trichopoda	47.92	2.00e-11	60.80
IUUC-Aca-005033	Anolis carolinensis	50.00	3.00e-12	64.30
IUUC-Aly-006305	Arabidopsis lyrata	50.72	4.00e-17	80.10
IUUC-Ath-007026	Arabidopsis thaliana	61.54	2.00e-16	77.80
IUUC-Ani-009396	Aspergillus nidulans	50.00	2.00e-10	58.50
IUUC-Ang-009734	Aspergillus niger	42.31	7.00e-10	56.60
IUUC-Aor-010062	Aspergillus oryzae	44.00	2.00e-10	57.80
IUUC-Bdi-015038	Brachypodium distachyon	56.60	1.00e-14	71.60
IUUC-Bol-015365	Brassica oleracea	56.90	2.00e-16	77.80
IUUC-Bra-017904	Brassica rapa	56.90	9.00e-17	78.60
IUUC-Cho-024467	Choloepus hoffmanni	48.00	1.00e-10	57.80
IUUC-Csv-025892	Ciona savignyi	43.75	6.00e-10	54.70
IUUC-Dre-028405	Danio rerio	47.17	1.00e-11	62.40
IUUC-Fox-037736	Fusarium oxysporum	41.82	1.00e-11	62.00
IUUC-Fso-038447	Fusarium solani	43.64	2.00e-11	62.40
IUUC-Ggr-039870	Gaeumannomyces graminis	42.31	6.00e-10	57.00
IUUC-Gma-043314	Glycine max	51.47	5.00e-17	79.70
IUUC-Lpe-051371	Leersia perrieri	45.45	3.00e-15	73.90
IUUC-Loc-052044	Lepisosteus oculatus	45.28	7.00e-11	59.70
IUUC-Meu-056824	Macropus eugenii	50.00	1.00e-11	61.20
IUUC-Mor-057098	Magnaporthe oryzae	40.00	2.00e-10	59.30
IUUC-Mpo-057321	Magnaporthe poae	42.31	5.00e-10	57.40
IUUC-Mtr-057949	Medicago truncatula	54.72	1.00e-15	75.10
IUUC-Mdo-062468	Monodelphis domestica	46.00	3.00e-11	60.50
IUUC-Mac-065081	Musa acuminata	61.22	2.00e-15	74.30
IUUC-Nfi-068450	Neosartorya fischeri	44.00	3.00e-10	58.20
IUUC-Ncr-068737	Neurospora crassa	41.67	2.00e-10	59.30
IUUC-Ont-072099	Oreochromis niloticus	43.40	2.00e-10	57.80
IUUC-Oba-075784	Oryza barthii	45.45	2.00e-11	60.80
IUUC-Obr-076184	Oryza brachyantha	31.25	5.00e-15	73.60
IUUC-Ogl-076965	Oryza glaberrima	57.69	2.00e-14	71.20
IUUC-Ogu-078414	Oryza glumaepatula	57.69	2.00e-14	71.20
IUUC-Oin-079430	Oryza indica	57.69	2.00e-14	71.20
IUUC-Olo-080739	Oryza longistaminata	57.69	2.00e-14	71.20
IUUC-Ome-081538	Oryza meridionalis	57.69	1.00e-14	71.60
IUUC-Oni-082633	Oryza nivara	57.69	1.00e-14	71.60
IUUC-Opu-084125	Oryza punctata	45.45	1.00e-14	71.20
IUUC-Oru-085061	Oryza rufipogon	57.69	2.00e-14	71.20
IUUC-Osa-086209	Oryza sativa	57.69	2.00e-14	71.20
IUUC-Ppa-095613	Physcomitrella patens	60.00	1.00e-15	75.50
IUUC-Ppe-101792	Prunus persica	50.82	1.00e-16	78.20
IUUC-Smo-108870	Selaginella moellendorffii	63.27	6.00e-15	72.80
IUUC-Sit-110011	Setaria italica	54.00	2.00e-11	60.80
IUUC-Sly-111915	Solanum lycopersicum	55.00	1.00e-16	78.20
IUUC-Stu-112568	Solanum tuberosum	55.00	2.00e-16	79.70
IUUC-Sbi-113958	Sorghum bicolor	42.27	4.00e-16	76.60
IUUC-Tsy-119134	Tarsius syrichta	42.86	9.00e-12	61.60
IUUC-Tca-121397	Theobroma cacao	55.77	3.00e-16	77.00
IUUC-Tre-121885	Trichoderma reesei	42.31	3.00e-09	54.70
IUUC-Tvi-122633	Trichoderma virens	42.31	3.00e-09	54.70
IUUC-Tme-127069	Tuber melanosporum	40.38	5.00e-09	53.90
IUUC-Uma-129414	Ustilago maydis	38.46	9.00e-06	43.50
IUUC-Vda-129671	Verticillium dahliae	41.82	7.00e-11	60.80
IUUC-Vvi-130945	Vitis vinifera	56.36	4.00e-16	76.60
IUUC-Yli-134442	Yarrowia lipolytica	44.00	1.00e-10	58.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence