iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017165

Ensembl Protein ID

Bra037932.1-P

UniProt Accession

M4FA18; M4FA18_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037932	Bra037932.1	Bra037932.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-27	93.2	373	410
UBD/Beta-Prp	6.70e-51	174.2	289	501

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHtd+v++++    s++++vs+++D tik+WDl +g +
   Q: 373  GHTDKVCAVDVskfSSRHVVSAAYDRTIKLWDLQKGYC 410
           8*******98888766****************998866 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           +h++ + ++ f  +++ l+tg++ g +k wd+ +g+l++sl g  + + ++ + +d k l+ +s+ +++ vwd+++g   htl+gh+d+v+++++s
   Q: 289  AHEGGCGSILFEYSSRTLFTGGQAGPVKMWDTNSGSLIKSLNGSLGNILDLAITHDNKSLIAASSSNNLFVWDVNSGRVRHTLTGHTDKVCAVDVS 384
           6778888999999*********************************************************************************** PP
   S: 104  p.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           + s+ ++vs+  drti++wdl++g+c +++l   +    c+++++    ++sG+ D+ +rlWd++t+kll +  g h ++v+s+s+++ng+ +++ 
   Q: 385  KfSSRHVVSAAYDRTIKLWDLQKGYCTNTVLFTSNCNAICLSIDG--LTVFSGHMDGNLRLWDIQTAKLLSEVAG-HSSAVTSVSLSRNGNMILTS 477
           *999*************************9999997777777777..99************************99.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnght 222
           ++d+  +++d +t e+  tl++  
   Q: 478  GRDNVHNVFDTRTLEICGTLRASG 501
           *************99999998875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPGSSLIMVG VLAQRGVVAI GLRAMEGPLL KDLRSQRNTR VSGPVVVYCG SLSCHNSHSS 60
SMASSVWSQE EKAMEAIKDA LRALRQRHLL EEGAHGPAIS ALSKPMISQG SEWKEKTEKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGGAA GCTCTCTGAT CATGGTTGGG GTCTTGGCAC AGAGAGGAGT GGTTGCTATC 60
GGCGTGAGTT GCCTTTTTAG GGTTTCACAA GGGGCGTTTT TCTATTCGCT CCTTGTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	50.20	5.00e-138	484.00
IUUC-Aml-002242	Ailuropoda melanoleuca	31.58	4.00e-38	152.00
IUUC-Atr-003073	Amborella trichopoda	60.20	7.00e-148	516.00
IUUC-Apl-003384	Anas platyrhynchos	34.77	3.00e-46	179.00
IUUC-Aca-004962	Anolis carolinensis	33.67	8.00e-44	171.00
IUUC-Aly-005435	Arabidopsis lyrata	90.53	0.00e+00	909.00
IUUC-Ath-006948	Arabidopsis thaliana	89.94	0.00e+00	925.00
IUUC-Ame-010915	Astyanax mexicanus	35.71	2.00e-41	162.00
IUUC-Bta-012388	Bos taurus	32.67	6.00e-45	175.00
IUUC-Bdi-014231	Brachypodium distachyon	51.78	7.00e-145	506.00
IUUC-Bol-016174	Brassica oleracea	97.44	0.00e+00	961.00
IUUC-Cel-018131	Caenorhabditis elegans	29.64	8.00e-32	131.00
IUUC-Cja-020002	Callithrix jacchus	28.81	6.00e-32	132.00
IUUC-Cfa-020484	Canis familiaris	33.66	1.00e-44	174.00
IUUC-Cpo-022156	Cavia porcellus	28.27	8.00e-46	177.00
IUUC-Csa-024019	Chlorocebus sabaeus	29.20	5.00e-50	192.00
IUUC-Cho-024311	Choloepus hoffmanni	35.10	5.00e-33	135.00
IUUC-Cin-025260	Ciona intestinalis	25.33	3.00e-33	136.00
IUUC-Csv-025836	Ciona savignyi	31.73	1.00e-25	108.00
IUUC-Dre-027702	Danio rerio	36.33	2.00e-47	183.00
IUUC-Dno-029728	Dasypus novemcinctus	34.32	2.00e-45	176.00
IUUC-Dor-030897	Dipodomys ordii	29.04	5.00e-37	148.00
IUUC-Dme-031595	Drosophila melanogaster	30.82	5.00e-36	145.00
IUUC-Ete-032969	Echinops telfairi	34.25	2.00e-43	169.00
IUUC-Eca-034214	Equus caballus	34.80	2.00e-42	166.00
IUUC-Eeu-034537	Erinaceus europaeus	31.35	4.00e-36	145.00
IUUC-Fca-036005	Felis catus	34.32	9.00e-45	174.00
IUUC-Fal-037593	Ficedula albicollis	34.65	2.00e-46	180.00
IUUC-Gmo-038880	Gadus morhua	32.95	5.00e-30	125.00
IUUC-Gga-040986	Gallus gallus	35.31	1.00e-47	184.00
IUUC-Gac-041351	Gasterosteus aculeatus	36.18	3.00e-49	189.00
IUUC-Gma-043265	Glycine max	73.37	0.00e+00	801.00
IUUC-Ggo-045427	Gorilla gorilla	34.77	2.00e-45	176.00
IUUC-Hsa-046632	Homo sapiens	34.77	2.00e-45	176.00
IUUC-Hvu-047655	Hordeum vulgare	51.36	5.00e-115	407.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	29.43	4.00e-50	192.00
IUUC-Lpe-051254	Leersia perrieri	52.86	6.00e-145	507.00
IUUC-Loc-052610	Lepisosteus oculatus	36.18	2.00e-49	189.00
IUUC-Laf-053936	Loxodonta africana	33.33	3.00e-44	172.00
IUUC-Mcc-055504	Macaca mulatta	34.44	3.00e-45	176.00
IUUC-Meu-056516	Macropus eugenii	33.00	5.00e-45	175.00
IUUC-Mtr-058062	Medicago truncatula	69.63	0.00e+00	741.00
IUUC-Mla-059081	Melampsora laricipopulina	30.89	6.00e-27	115.00
IUUC-Mga-059777	Meleagris gallopavo	34.87	5.00e-45	175.00
IUUC-Mmr-061298	Microcebus murinus	35.10	6.00e-46	178.00
IUUC-Mdo-062969	Monodelphis domestica	33.66	2.00e-45	176.00
IUUC-Mmu-064076	Mus musculus	34.45	3.00e-46	179.00
IUUC-Mac-065161	Musa acuminata	61.73	2.00e-172	598.00
IUUC-Mpu-066196	Mustela putorius furo	33.99	7.00e-45	174.00
IUUC-Mlu-067651	Myotis lucifugus	33.99	7.00e-45	175.00
IUUC-Nle-069853	Nomascus leucogenys	33.11	1.00e-42	167.00
IUUC-Opr-071039	Ochotona princeps	29.70	9.00e-38	151.00
IUUC-Ont-072489	Oreochromis niloticus	35.64	8.00e-49	188.00
IUUC-Oan-072703	Ornithorhynchus anatinus	34.75	2.00e-46	179.00
IUUC-Ocu-074205	Oryctolagus cuniculus	34.44	8.00e-45	174.00
IUUC-Oba-075619	Oryza barthii	53.23	6.00e-151	526.00
IUUC-Obr-076632	Oryza brachyantha	52.03	7.00e-141	493.00
IUUC-Ogl-077671	Oryza glaberrima	53.23	8.00e-151	526.00
IUUC-Ogu-078052	Oryza glumaepatula	53.42	4.00e-151	527.00
IUUC-Oin-079611	Oryza indica	53.42	2.00e-149	521.00
IUUC-Olo-080408	Oryza longistaminata	53.62	2.00e-140	492.00
IUUC-Ome-081560	Oryza meridionalis	53.42	3.00e-151	528.00
IUUC-Oni-082145	Oryza nivara	53.23	6.00e-151	526.00
IUUC-Opu-083918	Oryza punctata	53.82	2.00e-140	492.00
IUUC-Oru-084858	Oryza rufipogon	53.42	6.00e-149	520.00
IUUC-Osa-086277	Oryza sativa	53.42	1.00e-149	522.00
IUUC-Ola-086964	Oryzias latipes	34.47	1.00e-39	155.00
IUUC-Olu-087622	Ostreococcus lucimarinus	32.25	4.00e-62	231.00
IUUC-Oga-088765	Otolemur garnettii	29.20	4.00e-51	195.00
IUUC-Oar-090196	Ovis aries	32.86	6.00e-42	165.00
IUUC-Ptr-091676	Pan troglodytes	34.77	2.00e-45	176.00
IUUC-Pan-092068	Papio anubis	34.44	3.00e-45	176.00
IUUC-Psi-093367	Pelodiscus sinensis	35.31	3.00e-49	189.00
IUUC-Ppa-095699	Physcomitrella patens	49.01	2.00e-137	481.00
IUUC-Pfo-096067	Poecilia formosa	28.76	9.00e-49	187.00
IUUC-Pab-098111	Pongo abelii	34.77	4.00e-45	176.00
IUUC-Pop-099116	Populus trichocarpa	73.37	0.00e+00	788.00
IUUC-Pca-100680	Procavia capensis	34.70	4.00e-35	142.00
IUUC-Ppe-101790	Prunus persica	72.53	0.00e+00	793.00
IUUC-Pva-102871	Pteropus vampyrus	33.99	2.00e-46	179.00
IUUC-Pgr-103597	Puccinia graminis	30.42	1.00e-26	115.00
IUUC-Rno-106088	Rattus norvegicus	34.45	2.00e-46	179.00
IUUC-Sha-106984	Sarcophilus harrisii	32.79	2.00e-45	176.00
IUUC-Smo-109404	Selaginella moellendorffii	46.76	2.00e-131	462.00
IUUC-Sit-110828	Setaria italica	53.89	2.00e-150	525.00
IUUC-Sly-111009	Solanum lycopersicum	70.85	0.00e+00	712.00
IUUC-Stu-112370	Solanum tuberosum	70.55	0.00e+00	770.00
IUUC-Sar-113109	Sorex araneus	33.97	1.00e-25	110.00
IUUC-Sbi-114819	Sorghum bicolor	53.07	9.00e-148	516.00
IUUC-Ssc-116241	Sus scrofa	27.45	1.00e-43	170.00
IUUC-Tgu-116576	Taeniopygia guttata	34.77	5.00e-46	179.00
IUUC-Tru-118336	Takifugu rubripes	31.58	4.00e-35	142.00
IUUC-Tsy-119006	Tarsius syrichta	34.44	3.00e-45	176.00
IUUC-Tni-120300	Tetraodon nigroviridis	35.86	1.00e-47	184.00
IUUC-Tca-121002	Theobroma cacao	72.19	0.00e+00	773.00
IUUC-Tae-123652	Triticum aestivum	50.20	3.00e-138	484.00
IUUC-Tur-126463	Triticum urartu	49.80	6.00e-138	484.00
IUUC-Tbe-127631	Tupaia belangeri	29.02	8.00e-46	177.00
IUUC-Ttr-129005	Tursiops truncatus	34.54	3.00e-38	153.00
IUUC-Vvi-130878	Vitis vinifera	69.23	0.00e+00	741.00
IUUC-Xtr-132798	Xenopus tropicalis	32.13	5.00e-37	148.00
IUUC-Xma-133264	Xiphophorus maculatus	35.53	8.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence