iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069853

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01108276

Gene Name

ATG16L1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000008221.2	ENSNLET00000010637.2	ENSNLEP00000010137.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-29	99.2	406	445
UBD/Beta-Prp	1.00e-60	205.4	315	606

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v + +f  ++ ++vsGs+D t+k+WDlr+ v++k+
   Q: 406  GHSGKVLSAKFllDNARIVSGSHDRTLKLWDLRSKVCIKT 445
           8***********64489********************985 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
            +++++h++ +++v+fsp+++llatg++d+++k+w+v+ +k+    slsg +a++t+++f++ g++l+ +s+D + ++w ++++   ht
   Q: 315  LCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCefKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT 403
           57899************************************9999******************************************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           l+gh+ +vls +f  ++ ++vsGshdrt+++wdl+++ c++++++g +    c  + +++++++sG+ D+++r+Wd+++++++r+++  
   Q: 404  LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSS----CNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-- 486
           *****************************************9999988....888888889*************************6.. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
             ++++ l+++++++el+s+s+d  +k+           + +       d+++ v fsp++ +++ gs++gs++iW + +g++ k+l++
   Q: 487  LLGKITALDLNPERTELLSCSRDDLLKVMXXXXXXXXXXFSAPGfkcgsDWTR-VVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSK 574
           69******************************776655554444444416655.99********************************* PP
   S: 263  hnssvisvavlsfgdnvlvlgsedskvniwkl 294
           ++ss+i   ++s+ ++++v++++ +k+ +w++
   Q: 575  QHSSSINAVAWSPAGSHVVSVDKGCKAVLWAQ 606
           ******************************85 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MSSGLRAADF PRWKRHISEQ LRRRDRLQRQ AFEEIILQYN KLLEKSDLHS VLAQKLQAEK 60
HDIPNRHEIS PGHDGTWNDS QLQEMAQLRI KHQEELTELH KKRGELAQLV IDLNNQMQRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAGCGAGC GCCCTGCGTA GGCACCGGCC CCTGAGCCCA TGCGGCGTAA TTCGCTGGGT 60
GAGGGGGAGG GTCTTCCGGC CCTCTTGAAA ACCATTTCCG GCAGGAGCCG GAAGACCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	25.58	5.00e-31	129.00
IUUC-Aml-002242	Ailuropoda melanoleuca	85.60	0.00e+00	1021.00
IUUC-Apl-003384	Anas platyrhynchos	86.31	0.00e+00	1037.00
IUUC-Aca-004962	Anolis carolinensis	82.34	0.00e+00	1000.00
IUUC-Aly-005435	Arabidopsis lyrata	28.41	7.00e-44	171.00
IUUC-Ath-006948	Arabidopsis thaliana	33.44	2.00e-43	170.00
IUUC-Ame-010915	Astyanax mexicanus	76.23	2.00e-145	508.00
IUUC-Bta-012388	Bos taurus	90.69	0.00e+00	1122.00
IUUC-Bdi-014231	Brachypodium distachyon	24.48	1.00e-34	140.00
IUUC-Bol-016174	Brassica oleracea	28.87	1.00e-43	171.00
IUUC-Bra-017165	Brassica rapa	27.55	6.00e-44	171.00
IUUC-Cel-018131	Caenorhabditis elegans	29.91	6.00e-60	225.00
IUUC-Cja-018898	Callithrix jacchus	87.77	0.00e+00	1012.00
IUUC-Cfa-020484	Canis familiaris	94.23	0.00e+00	1136.00
IUUC-Cpo-022156	Cavia porcellus	92.73	0.00e+00	1108.00
IUUC-Csa-024019	Chlorocebus sabaeus	93.90	0.00e+00	1117.00
IUUC-Cho-024311	Choloepus hoffmanni	78.53	0.00e+00	937.00
IUUC-Cin-025260	Ciona intestinalis	36.94	6.00e-98	351.00
IUUC-Csv-025836	Ciona savignyi	42.03	2.00e-43	168.00
IUUC-Dre-027702	Danio rerio	71.52	0.00e+00	853.00
IUUC-Dno-029728	Dasypus novemcinctus	89.26	0.00e+00	1119.00
IUUC-Dor-030587	Dipodomys ordii	81.69	1.00e-112	400.00
IUUC-Dme-031595	Drosophila melanogaster	37.34	1.00e-101	363.00
IUUC-Ete-032969	Echinops telfairi	74.30	0.00e+00	756.00
IUUC-Eca-034214	Equus caballus	93.70	0.00e+00	924.00
IUUC-Eeu-034537	Erinaceus europaeus	87.00	0.00e+00	889.00
IUUC-Fca-036005	Felis catus	90.36	0.00e+00	1050.00
IUUC-Fal-037593	Ficedula albicollis	83.10	0.00e+00	967.00
IUUC-Gmo-039042	Gadus morhua	63.36	0.00e+00	651.00
IUUC-Gga-040986	Gallus gallus	83.15	0.00e+00	1038.00
IUUC-Gac-041351	Gasterosteus aculeatus	70.35	0.00e+00	863.00
IUUC-Gma-043452	Glycine max	32.78	2.00e-43	170.00
IUUC-Ggo-045427	Gorilla gorilla	95.03	0.00e+00	1153.00
IUUC-Hsa-046632	Homo sapiens	97.53	0.00e+00	1175.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	91.28	0.00e+00	1082.00
IUUC-Lch-049439	Latimeria chalumnae	49.59	2.00e-137	482.00
IUUC-Lpe-051254	Leersia perrieri	24.55	4.00e-37	149.00
IUUC-Loc-052610	Lepisosteus oculatus	72.26	0.00e+00	868.00
IUUC-Laf-053936	Loxodonta africana	87.88	0.00e+00	1088.00
IUUC-Mcc-055504	Macaca mulatta	90.91	0.00e+00	1156.00
IUUC-Meu-056516	Macropus eugenii	80.77	0.00e+00	964.00
IUUC-Mtr-058062	Medicago truncatula	30.69	5.00e-40	158.00
IUUC-Mga-059777	Meleagris gallopavo	83.17	0.00e+00	1025.00
IUUC-Mmr-061298	Microcebus murinus	93.74	0.00e+00	1132.00
IUUC-Mdo-062969	Monodelphis domestica	85.26	0.00e+00	1046.00
IUUC-Mmu-064076	Mus musculus	90.35	0.00e+00	1086.00
IUUC-Mac-065161	Musa acuminata	26.55	2.00e-37	150.00
IUUC-Mpu-066196	Mustela putorius furo	91.81	0.00e+00	1111.00
IUUC-Mlu-067651	Myotis lucifugus	92.11	0.00e+00	1111.00
IUUC-Opr-070350	Ochotona princeps	94.04	7.00e-120	424.00
IUUC-Ont-072489	Oreochromis niloticus	70.07	0.00e+00	849.00
IUUC-Oan-072703	Ornithorhynchus anatinus	79.39	0.00e+00	944.00
IUUC-Ocu-074205	Oryctolagus cuniculus	90.37	0.00e+00	1115.00
IUUC-Oba-075619	Oryza barthii	25.98	5.00e-36	145.00
IUUC-Obr-076632	Oryza brachyantha	28.42	8.00e-35	141.00
IUUC-Ogl-077671	Oryza glaberrima	26.17	5.00e-36	145.00
IUUC-Ogu-078052	Oryza glumaepatula	26.17	5.00e-36	145.00
IUUC-Oin-079611	Oryza indica	25.98	6.00e-34	138.00
IUUC-Olo-080408	Oryza longistaminata	26.05	2.00e-34	139.00
IUUC-Ome-081560	Oryza meridionalis	26.17	4.00e-36	145.00
IUUC-Oni-082145	Oryza nivara	25.98	5.00e-36	145.00
IUUC-Opu-083918	Oryza punctata	25.67	7.00e-34	138.00
IUUC-Oru-084858	Oryza rufipogon	25.98	8.00e-34	138.00
IUUC-Osa-086277	Oryza sativa	25.98	7.00e-34	138.00
IUUC-Ola-086816	Oryzias latipes	68.61	4.00e-98	350.00
IUUC-Olu-087622	Ostreococcus lucimarinus	32.11	4.00e-40	158.00
IUUC-Oga-088765	Otolemur garnettii	91.94	0.00e+00	1044.00
IUUC-Oar-090196	Ovis aries	86.90	0.00e+00	969.00
IUUC-Ptr-091676	Pan troglodytes	97.69	0.00e+00	1177.00
IUUC-Pan-092068	Papio anubis	94.55	0.00e+00	1146.00
IUUC-Psi-093367	Pelodiscus sinensis	85.50	0.00e+00	1021.00
IUUC-Ppa-095699	Physcomitrella patens	28.09	1.00e-38	154.00
IUUC-Pfo-096067	Poecilia formosa	71.09	0.00e+00	838.00
IUUC-Pab-098111	Pongo abelii	95.03	0.00e+00	1151.00
IUUC-Pop-099116	Populus trichocarpa	30.79	2.00e-39	157.00
IUUC-Pca-100680	Procavia capensis	80.20	0.00e+00	908.00
IUUC-Pva-102871	Pteropus vampyrus	88.57	0.00e+00	1023.00
IUUC-Rno-106088	Rattus norvegicus	90.03	0.00e+00	1085.00
IUUC-Sha-106984	Sarcophilus harrisii	88.21	0.00e+00	1048.00
IUUC-Smo-108983	Selaginella moellendorffii	26.52	2.00e-39	157.00
IUUC-Sit-110828	Setaria italica	26.63	6.00e-42	165.00
IUUC-Sly-111009	Solanum lycopersicum	25.97	7.00e-45	174.00
IUUC-Stu-112370	Solanum tuberosum	26.36	1.00e-45	177.00
IUUC-Sar-113659	Sorex araneus	63.85	6.00e-93	333.00
IUUC-Sbi-114819	Sorghum bicolor	27.37	8.00e-39	154.00
IUUC-Ssc-116241	Sus scrofa	90.77	0.00e+00	1088.00
IUUC-Tgu-116576	Taeniopygia guttata	86.16	0.00e+00	1067.00
IUUC-Tru-118336	Takifugu rubripes	62.73	0.00e+00	706.00
IUUC-Tsy-119006	Tarsius syrichta	89.25	0.00e+00	1071.00
IUUC-Tni-120300	Tetraodon nigroviridis	72.61	0.00e+00	843.00
IUUC-Tca-121002	Theobroma cacao	27.75	1.00e-45	177.00
IUUC-Tae-124868	Triticum aestivum	29.07	7.00e-32	131.00
IUUC-Tur-126463	Triticum urartu	28.37	4.00e-31	129.00
IUUC-Tbe-127631	Tupaia belangeri	94.34	0.00e+00	903.00
IUUC-Ttr-129005	Tursiops truncatus	82.66	3.00e-158	551.00
IUUC-Vpa-130246	Vicugna pacos	84.37	0.00e+00	831.00
IUUC-Vvi-130878	Vitis vinifera	33.12	5.00e-41	162.00
IUUC-Xtr-132798	Xenopus tropicalis	74.06	0.00e+00	865.00
IUUC-Xma-133264	Xiphophorus maculatus	71.04	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence