iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113989

Ensembl Protein ID

Sb02g004890.1

UniProt Accession

C5XB76; C5XB76_SORBI

Genbank Protein ID

EER95977.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G058300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g004890	Sb02g004890.1	Sb02g004890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.30e-09	36.7	142	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +++Ce+C++wfHpaC +++++e ++ ++ ++C+ C++
   Q: 142  FC-KCEMPYNPDDLMIQCEECSDWFHPACIGMTIKEAKKLEH-FFCQTCTA 190
           78.7999**************************777777776.******86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAKSRPPKRI LESYTIKGSD KVIKPGDCVL MRASDASKPP YVARVEAIEA AGSRGTNVRV 60
RVRWYYRPEE SIGGRRPFHG SKEVFLSDHY DVQSADTIEG KCNVHSFRSY TKLDSVNAED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGCCAAAC CCTAGCGCCC GCGCCCGCGC CCCTGGTCCT CCGCCCCCAC CACCGTCGCC 60
GTCGCGGTCG GGCGCCCCCT ATGGCGAAGT CGCGGCCGCC CAAGCGGATC CTCGAGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering

KEGG

sbi:SORBI_02g004890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005443	Arabidopsis lyrata	64.65	4.00e-84	303.00
IUUC-Acl-008106	Aspergillus clavatus	41.82	3.00e-05	43.50
IUUC-Afu-008783	Aspergillus fumigatus	39.29	6.00e-05	42.40
IUUC-Bdi-015071	Brachypodium distachyon	91.78	3.00e-121	426.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	49.10	4.00e-48	183.00
IUUC-Fox-037812	Fusarium oxysporum	42.59	7.00e-05	41.20
IUUC-Fso-038446	Fusarium solani	45.45	5.00e-06	44.70
IUUC-Gma-042998	Glycine max	70.18	7.00e-94	335.00
IUUC-Hvu-047723	Hordeum vulgare	79.36	2.00e-102	363.00
IUUC-Lpe-051138	Leersia perrieri	97.13	1.00e-122	431.00
IUUC-Mor-057044	Magnaporthe oryzae	37.93	2.00e-04	40.00
IUUC-Mtr-058621	Medicago truncatula	70.45	2.00e-92	330.00
IUUC-Mvi-060256	Microbotryum violaceum	31.48	5.00e-06	45.80
IUUC-Nfi-068438	Neosartorya fischeri	39.29	6.00e-05	42.40
IUUC-Oba-075855	Oryza barthii	96.65	3.00e-122	429.00
IUUC-Obr-076353	Oryza brachyantha	80.24	9.00e-118	417.00
IUUC-Ogl-077547	Oryza glaberrima	92.23	2.00e-114	403.00
IUUC-Ogu-078224	Oryza glumaepatula	79.00	6.00e-102	362.00
IUUC-Oin-079179	Oryza indica	96.33	9.00e-127	444.00
IUUC-Olo-080461	Oryza longistaminata	96.20	5.00e-108	382.00
IUUC-Ome-081714	Oryza meridionalis	96.26	4.00e-123	432.00
IUUC-Oni-082099	Oryza nivara	96.26	4.00e-123	432.00
IUUC-Opu-083906	Oryza punctata	79.45	2.00e-102	363.00
IUUC-Oru-085087	Oryza rufipogon	79.00	2.00e-102	363.00
IUUC-Osa-085620	Oryza sativa	96.33	9.00e-127	444.00
IUUC-Pop-098853	Populus trichocarpa	71.56	1.00e-93	334.00
IUUC-Pca-100779	Procavia capensis	30.17	1.00e-11	64.70
IUUC-Ppe-101818	Prunus persica	67.89	1.00e-90	325.00
IUUC-Ssl-108594	Sclerotinia sclerotiorum	25.64	4.00e-04	40.80
IUUC-Sit-110445	Setaria italica	98.17	2.00e-128	450.00
IUUC-Sly-110932	Solanum lycopersicum	69.72	1.00e-92	331.00
IUUC-Stu-112357	Solanum tuberosum	68.81	8.00e-91	325.00
IUUC-Sre-115140	Sporisorium reilianum	57.14	2.00e-09	57.40
IUUC-Tca-121689	Theobroma cacao	71.29	1.00e-91	328.00
IUUC-Tre-122185	Trichoderma reesei	40.74	2.00e-05	42.40
IUUC-Tvi-122269	Trichoderma virens	43.64	3.00e-05	42.00
IUUC-Tae-123050	Triticum aestivum	92.20	5.00e-123	432.00
IUUC-Uma-129425	Ustilago maydis	46.81	1.00e-07	51.20
IUUC-Vvi-131074	Vitis vinifera	72.02	7.00e-94	335.00
IUUC-Zma-135727	Zea mays	99.08	9.00e-129	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence