iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d044551	Zm00001d044551_T016	Zm00001d044551_T016
Zm00001d044551	Zm00001d044551_T013	Zm00001d044551_T013
Zm00001d044551	Zm00001d044551_T015	Zm00001d044551_T015
Zm00001d044551	Zm00001d044551_T017	Zm00001d044551_T017
Zm00001d044551	Zm00001d044551_T001	Zm00001d044551_T001
Zm00001d044551	Zm00001d044551_T002	Zm00001d044551_T002
Zm00001d044551	Zm00001d044551_T003	Zm00001d044551_T003
Zm00001d044551	Zm00001d044551_T012	Zm00001d044551_T012

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	32.7	233	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+ +w       + + +CP Cr
   Q: 233  CPICLEEFhvGNEVRGLPCAHNFHVECIDQW------LRLNVKCPRCR 274
           ********99666******************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPMRGVDFKW YDGFFLSMLA TSVIIVSINW KRYRLCAHPL HIWIVVDYTT VFIFRLLMFV 60
DNGLAAGMGL DLGWQQRYAR FCGRIIVLSV LVLLLYPFLW VWTVIGTLWF STARGCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGTTGCCTT GCGACTTGCG AGTGGGCGGC GGAGTGCCCG AGTCGGTGCG GCCGTGCAGG 60
AGCGTTTGCT GTCTCCGTTT CCGTCCCGTT CCCTTTCGTG GACTGTTTTG GAAGGCGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100284043

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	89.14	1.00e-164	572.00
IUUC-Atr-002648	Amborella trichopoda	72.61	1.00e-150	525.00
IUUC-Aly-006490	Arabidopsis lyrata	72.96	4.00e-146	510.00
IUUC-Ath-007655	Arabidopsis thaliana	72.96	7.00e-147	512.00
IUUC-Bdi-014759	Brachypodium distachyon	86.63	3.00e-157	547.00
IUUC-Bol-015136	Brassica oleracea	71.94	1.00e-144	505.00
IUUC-Bra-018024	Brassica rapa	70.36	1.00e-135	475.00
IUUC-Gma-042879	Glycine max	82.25	2.00e-158	551.00
IUUC-Hvu-047589	Hordeum vulgare	93.20	5.00e-75	272.00
IUUC-Lpe-051403	Leersia perrieri	72.26	9.00e-126	442.00
IUUC-Mtr-058746	Medicago truncatula	80.94	4.00e-160	556.00
IUUC-Mac-064833	Musa acuminata	82.20	6.00e-163	566.00
IUUC-Oba-075099	Oryza barthii	85.35	3.00e-179	620.00
IUUC-Obr-076541	Oryza brachyantha	86.12	0.00e+00	627.00
IUUC-Ogl-077544	Oryza glaberrima	86.12	1.00e-179	621.00
IUUC-Ogu-078123	Oryza glumaepatula	81.75	9.00e-164	568.00
IUUC-Oin-079313	Oryza indica	86.21	1.00e-172	598.00
IUUC-Olo-080383	Oryza longistaminata	62.69	6.00e-115	406.00
IUUC-Ome-081106	Oryza meridionalis	74.32	2.00e-138	484.00
IUUC-Oni-082730	Oryza nivara	86.05	0.00e+00	634.00
IUUC-Opu-083224	Oryza punctata	85.64	1.00e-178	618.00
IUUC-Oru-085150	Oryza rufipogon	84.26	3.00e-148	517.00
IUUC-Osa-086306	Oryza sativa	86.30	2.00e-178	617.00
IUUC-Ppa-095217	Physcomitrella patens	49.67	1.00e-76	278.00
IUUC-Pop-099421	Populus trichocarpa	74.19	1.00e-145	508.00
IUUC-Ppe-101399	Prunus persica	76.62	7.00e-130	456.00
IUUC-Ssl-108585	Sclerotinia sclerotiorum	48.28	5.00e-10	58.90
IUUC-Smo-109501	Selaginella moellendorffii	67.24	5.00e-113	399.00
IUUC-Sit-109685	Setaria italica	94.92	0.00e+00	694.00
IUUC-Sly-111730	Solanum lycopersicum	78.15	2.00e-158	551.00
IUUC-Stu-112358	Solanum tuberosum	76.29	6.00e-156	543.00
IUUC-Sbi-114646	Sorghum bicolor	97.59	0.00e+00	708.00
IUUC-Tca-121643	Theobroma cacao	75.65	2.00e-161	560.00
IUUC-Tae-124899	Triticum aestivum	88.24	4.00e-170	590.00
IUUC-Tur-126639	Triticum urartu	91.87	2.00e-132	466.00
IUUC-Vvi-131627	Vitis vinifera	71.36	4.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence