iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114828

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G029500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g002770	Sb03g002770.1	Sb03g002770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-13	49.4	665	692
E3 activity/RING/RING	3.10e-06	28.4	17	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvW 28
           gH++ v+cl   s ++l sGs+Dgti++W
   Q: 665  GHKSTVSCLVVaS-GILYSGSWDGTIRLW 692
           8*******97776.9************** PP

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkw..pglknssskefrCPlC 45
           C++Cl++f+     p+vlpCgH  +  C+ ++           + rCPlC
   Q: 17   CPVCLSPFDAAsvvPRVLPCGHSLCGPCITALppASAAAAGASSLRCPLC 66
           ********77666699*************99955334444566669**** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATTAPPVDA EAETPECPVC LSPFDAASVV PRVLPCGHSL CGPCITALPP ASAAAAGASS 60
LRCPLCSQCV PFARTLGPSS LPKNLALLAL LPSPSHALTA TPATAPPPRP RQLPLHAAHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACCA CAGCGCCACC GGTGGATGCA GAAGCAGAAA CCCCCGAGTG CCCGGTGTGC 60
CTCTCCCCAT TCGACGCCGC CTCCGTTGTG CCGCGCGTCC TCCCGTGCGG CCACTCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_03g002770

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	55.89	0.00e+00	631.00
IUUC-Atr-003105	Amborella trichopoda	39.74	1.00e-115	410.00
IUUC-Aly-006480	Arabidopsis lyrata	30.73	3.00e-71	263.00
IUUC-Ath-007227	Arabidopsis thaliana	35.65	2.00e-107	382.00
IUUC-Bdi-015002	Brachypodium distachyon	67.80	0.00e+00	937.00
IUUC-Bol-015912	Brassica oleracea	36.15	2.00e-106	379.00
IUUC-Bra-017564	Brassica rapa	35.40	5.00e-110	391.00
IUUC-Gma-043879	Glycine max	35.77	2.00e-129	456.00
IUUC-Hvu-047671	Hordeum vulgare	69.34	0.00e+00	849.00
IUUC-Lpe-051223	Leersia perrieri	67.07	0.00e+00	922.00
IUUC-Mtr-058342	Medicago truncatula	54.18	1.00e-86	311.00
IUUC-Mac-065113	Musa acuminata	43.74	0.00e+00	632.00
IUUC-Oba-075807	Oryza barthii	69.54	0.00e+00	992.00
IUUC-Obr-076101	Oryza brachyantha	68.27	0.00e+00	986.00
IUUC-Ogl-077321	Oryza glaberrima	67.64	0.00e+00	968.00
IUUC-Ogu-078456	Oryza glumaepatula	70.35	0.00e+00	971.00
IUUC-Oin-079822	Oryza indica	69.23	0.00e+00	1000.00
IUUC-Olo-080336	Oryza longistaminata	71.69	0.00e+00	762.00
IUUC-Ome-081976	Oryza meridionalis	70.47	0.00e+00	980.00
IUUC-Oni-082359	Oryza nivara	69.75	0.00e+00	1000.00
IUUC-Opu-083757	Oryza punctata	70.04	0.00e+00	988.00
IUUC-Oru-085207	Oryza rufipogon	69.50	0.00e+00	975.00
IUUC-Osa-085546	Oryza sativa	67.08	0.00e+00	732.00
IUUC-Ppa-095665	Physcomitrella patens	37.97	2.00e-53	203.00
IUUC-Pop-098862	Populus trichocarpa	36.55	1.00e-124	440.00
IUUC-Ppe-101295	Prunus persica	36.44	8.00e-129	453.00
IUUC-Smo-109481	Selaginella moellendorffii	29.07	2.00e-55	210.00
IUUC-Sit-110599	Setaria italica	79.90	0.00e+00	1181.00
IUUC-Sly-111867	Solanum lycopersicum	51.32	5.00e-91	327.00
IUUC-Stu-112296	Solanum tuberosum	33.95	4.00e-126	444.00
IUUC-Tca-121601	Theobroma cacao	37.72	6.00e-126	444.00
IUUC-Tae-125537	Triticum aestivum	69.51	0.00e+00	932.00
IUUC-Tur-126303	Triticum urartu	71.45	0.00e+00	799.00
IUUC-Vvi-130947	Vitis vinifera	37.95	3.00e-149	521.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence