iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+d + +l+    C H+fh  C+ +w        ++++CPlCr
   Q: 124  CSVCLSKFED-VEILRllpkCRHAFHIGCIDQW------LEQHATCPLCR 166
           ********99.55555555**************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV 60
YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD KKAIESLPFF RFSALKGLKQ 120

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Nucleotide Sequence
(Fasta)

TTATTGCGTC TAAAAACATC TTTCTGTCCA AATTCATAAA CACGACTTTT TTTGTTTTCG 60
TCTTTTTCTC ATCGAATCAC CATCCTAAAA CAATGAATTC ACCACAAGAA ATCTCCATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G20030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006498	Arabidopsis lyrata	89.70	0.00e+00	643.00
IUUC-Bol-016280	Brassica oleracea	70.62	3.00e-148	517.00
IUUC-Hvu-047489	Hordeum vulgare	34.99	5.00e-48	184.00
IUUC-Lpe-051018	Leersia perrieri	34.43	3.00e-44	171.00
IUUC-Mtr-057998	Medicago truncatula	44.83	4.00e-79	287.00
IUUC-Mac-064701	Musa acuminata	43.22	8.00e-67	246.00
IUUC-Oba-075667	Oryza barthii	35.13	4.00e-45	174.00
IUUC-Ogl-077500	Oryza glaberrima	35.13	4.00e-45	174.00
IUUC-Ogu-078252	Oryza glumaepatula	41.32	1.00e-40	159.00
IUUC-Ome-081414	Oryza meridionalis	34.86	4.00e-41	161.00
IUUC-Oni-082687	Oryza nivara	35.13	4.00e-45	174.00
IUUC-Opu-084088	Oryza punctata	37.12	5.00e-51	194.00
IUUC-Oru-084787	Oryza rufipogon	35.77	2.00e-45	175.00
IUUC-Osa-085704	Oryza sativa	35.13	4.00e-45	174.00
IUUC-Stu-111967	Solanum tuberosum	48.07	1.00e-82	299.00
IUUC-Sbi-114371	Sorghum bicolor	36.43	7.00e-38	150.00
IUUC-Tae-125327	Triticum aestivum	33.84	2.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence