iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126101

Ensembl Protein ID

TRIUR3_30372-P1

UniProt Accession

M8ALQ3; M8ALQ3_TRIUA

Genbank Protein ID

EMS61794.1

Protein Name

Putative DNA repair protein RAD23

Genbank Nucleotide ID

KD090734

Gene Name

TRIUR3_30372

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_30372	TRIUR3_30372-T1	TRIUR3_30372-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-22	79.7	163	204
ULD/UDP/UBQ/UBQ_PIM	4.70e-22	78.5	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   ++r+ +++aLraa+nn+e+A++yL++g
   Q: 163  LEQTVQQILDMGggtWERDMVVRALRAAYNNPERAIDYLYSG 204
           699************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl+vktlkg+ fe+e++++++v e+K  i++ +g   +p++q+ +Iy+GkiLkDdttL+++++ ++s+++++++k+k
   Q: 1    MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGqnvYPADQLMIIYQGKILKDDTTLEANKVAENSFLVIMLSKPK 78
           99*************************************************************************987 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKLNVKTLKG TSFEIEATPE SSVGEVKRII ESAQGQNVYP ADQLMIIYQG KILKDDTTLE 60
ANKVAENSFL VIMLSKPKAS SSSGASTASK APASQSQPAT PPAPVASAAR SPPSQAPVAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCA ACGTGAAGAC CCTCAAGGGC ACAAGCTTCG AGATCGAGGC GACCCCCGAG 60
TCCTCGGTAC GATCCATCTC CCCCCTTCCT CTTGTCTCTA TCTCTCTCCA ATCGCGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	97.17	3.00e-160	556.00
IUUC-Ago-007830	Ashbya gossypii	27.23	9.00e-16	77.00
IUUC-Bdi-014718	Brachypodium distachyon	79.30	8.00e-151	525.00
IUUC-Fal-037148	Ficedula albicollis	38.89	9.00e-18	83.60
IUUC-Gga-040544	Gallus gallus	32.38	2.00e-21	95.90
IUUC-Hvu-047788	Hordeum vulgare	82.16	9.00e-84	302.00
IUUC-Mtr-058148	Medicago truncatula	55.79	1.00e-105	375.00
IUUC-Mvi-060220	Microbotryum violaceum	45.45	3.00e-23	102.00
IUUC-Opr-070234	Ochotona princeps	44.64	5.00e-09	54.30
IUUC-Oba-075951	Oryza barthii	77.52	3.00e-134	470.00
IUUC-Obr-076631	Oryza brachyantha	74.13	2.00e-97	348.00
IUUC-Ogl-077152	Oryza glaberrima	77.52	3.00e-134	470.00
IUUC-Ogu-078896	Oryza glumaepatula	77.05	3.00e-134	470.00
IUUC-Opu-083655	Oryza punctata	76.58	8.00e-129	452.00
IUUC-Ola-086474	Oryzias latipes	31.96	2.00e-18	84.70
IUUC-Spo-108298	Schizosaccharomyces pombe	31.60	7.00e-38	150.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	39.22	1.00e-16	79.70
IUUC-Sbi-114835	Sorghum bicolor	92.06	9.00e-65	239.00
IUUC-Tgu-116918	Taeniopygia guttata	30.17	5.00e-24	104.00
IUUC-Tca-121661	Theobroma cacao	54.50	2.00e-101	361.00
IUUC-Tae-122859	Triticum aestivum	96.23	7.00e-151	525.00
IUUC-Vpa-130357	Vicugna pacos	41.18	5.00e-12	64.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence