iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110533

Ensembl Protein ID

Si008014m

UniProt Accession

K3Y1E9; K3Y1E9_SETIT

Genbank Protein ID

KQL12304.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003531

Gene Name

LOC101754209; SETIT_008014mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si008014m.g	Si008014m	Si008014m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-23	83.8	280	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +flCpIsle+M+dP       ty+r+sI+kwl+ g++tcP+t+qpl++ +l Pn +l++li +wce+n++
   Q: 280  IPNDFLCPISLEIMTDP-------TYERRSIQKWLDAGQRTCPKTQQPLAHLSLAPNFALKNLILQWCEKNKV 345
           799**************.......8*********************************************987 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MLPWSIFPRA TSGSDAEPEP EAEAEAETSE PSGRQVSDEA LVEELLTAVA SARSFQEFRR 60
SQSKECLSLL RWLQLVLPLI QEIRETAPSL TDDAYRRLAL LGRAFHAARR LLRCCHDGSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCCGT GGTCCATCTT TCCACGGGCG ACGTCCGGGT CCGACGCGGA GCCGGAACCG 60
GAGGCGGAGG CGGAGGCAGA GACATCGGAG CCGTCGGGGA GGCAGGTGTC GGACGAGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	80.30	0.00e+00	959.00
IUUC-Atr-002787	Amborella trichopoda	58.08	0.00e+00	651.00
IUUC-Aly-006301	Arabidopsis lyrata	54.17	0.00e+00	628.00
IUUC-Ath-007379	Arabidopsis thaliana	54.43	6.00e-180	623.00
IUUC-Bdi-014836	Brachypodium distachyon	81.17	0.00e+00	1001.00
IUUC-Bol-016076	Brassica oleracea	54.92	0.00e+00	631.00
IUUC-Bra-017350	Brassica rapa	54.13	2.00e-179	621.00
IUUC-Lpe-051074	Leersia perrieri	76.21	0.00e+00	893.00
IUUC-Mtr-058419	Medicago truncatula	55.46	0.00e+00	647.00
IUUC-Oba-075907	Oryza barthii	77.18	0.00e+00	898.00
IUUC-Ogl-077690	Oryza glaberrima	77.18	0.00e+00	898.00
IUUC-Ogu-078150	Oryza glumaepatula	77.18	0.00e+00	898.00
IUUC-Olo-081047	Oryza longistaminata	77.18	0.00e+00	892.00
IUUC-Ome-081561	Oryza meridionalis	77.02	0.00e+00	905.00
IUUC-Oni-082780	Oryza nivara	77.18	0.00e+00	898.00
IUUC-Opu-083836	Oryza punctata	77.23	0.00e+00	910.00
IUUC-Oru-084958	Oryza rufipogon	77.18	0.00e+00	898.00
IUUC-Sly-111424	Solanum lycopersicum	55.28	0.00e+00	657.00
IUUC-Stu-112097	Solanum tuberosum	55.74	0.00e+00	656.00
IUUC-Sbi-113821	Sorghum bicolor	91.15	0.00e+00	925.00
IUUC-Tae-125148	Triticum aestivum	79.19	0.00e+00	979.00
IUUC-Tur-126004	Triticum urartu	80.04	0.00e+00	853.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence