iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099321

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTR_0010s24940g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s24940	POPTR_0010s24940.1	POPTR_0010s24940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.5	79	121

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+kd   +++lp C H+fha+C+  w       + + +CP Cr
   Q: 79   CSICLADYKDSdlLRLLPdCDHLFHAQCIDPW------LKLHTTCPMCR 121
           ********88666778889*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGVLSAIAIA ILAYYFCTRK PLPAGHSNHD GSLSIDDQDS VVIEIGLDEA TLNTYPKLVY 60
SEAKEKLGKG DDSVAASCCS ICLADYKDSD LLRLLPDCDH LFHAQCIDPW LKLHTTCPMC 120

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Nucleotide Sequence
(Fasta)

ATGGGTGTAC TTTCAGCAAT AGCAATTGCT ATTCTTGCTT ATTATTTTTG CACCAGGAAA 60
CCATTACCTG CAGGCCATTC TAATCATGAT GGTTCCTTGT CCATAGATGA TCAAGACTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s24940g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogu-078903	Oryza glumaepatula	44.55	1.00e-22	99.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence