iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s04430	POPTR_0017s04430.2	POPTR_0017s04430.2
POPTR_0017s04430	POPTR_0017s04430.1	POPTR_0017s04430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-07	31.6	523	567

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++++       d  +v+pC H+fh  Clq+w         +  CP+Cr
   Q: 523  CVICMTSIdlthrsND-CMVTPCDHFFHSGCLQRW------MDIKMECPTCR 567
           ******9988888555.889***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVFGFFDMVN SEGFSWRRGL GFVVWIVFWL WFVFLGLLQP VVGLRPLRER AQSWGDEWLF 60
IRKDENDLGP FSMWNITGTY RGSWKFLDST NSSSKFPDLR KSNGDSVIEL FSRPTKINGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGACATGT CAACATTTAC GAAAATCTTC ATCTTTGTTT CTTAATGATC GCATCTTTAT 60
CAGTCTTACA TGGTTTTTAA CTGATGAAGG GCTGCTAAGT ATTGTTTGGT GTGCGTTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000147	Aegilops tauschii	76.74	5.00e-85	307.00
IUUC-Atr-003038	Amborella trichopoda	75.58	0.00e+00	775.00
IUUC-Aly-006319	Arabidopsis lyrata	77.48	0.00e+00	856.00
IUUC-Ath-007176	Arabidopsis thaliana	77.40	0.00e+00	877.00
IUUC-Afu-008993	Aspergillus fumigatus	24.28	8.00e-27	115.00
IUUC-Bdi-014178	Brachypodium distachyon	76.25	0.00e+00	798.00
IUUC-Bol-016426	Brassica oleracea	75.68	0.00e+00	871.00
IUUC-Bra-017095	Brassica rapa	77.74	0.00e+00	866.00
IUUC-Cre-022642	Chlamydomonas reinhardtii	39.92	2.00e-35	142.00
IUUC-Gma-042652	Glycine max	82.59	0.00e+00	914.00
IUUC-Hvu-047407	Hordeum vulgare	74.08	0.00e+00	753.00
IUUC-Lpe-050804	Leersia perrieri	71.73	0.00e+00	743.00
IUUC-Mtr-057662	Medicago truncatula	82.21	0.00e+00	915.00
IUUC-Mvi-060396	Microbotryum violaceum	31.66	2.00e-20	94.40
IUUC-Mac-065030	Musa acuminata	75.73	0.00e+00	809.00
IUUC-Nfi-068252	Neosartorya fischeri	23.96	8.00e-26	111.00
IUUC-Oba-075543	Oryza barthii	70.90	0.00e+00	681.00
IUUC-Obr-076427	Oryza brachyantha	76.26	0.00e+00	795.00
IUUC-Ogl-077281	Oryza glaberrima	76.15	0.00e+00	804.00
IUUC-Ogu-078135	Oryza glumaepatula	71.31	0.00e+00	685.00
IUUC-Oin-079565	Oryza indica	73.08	0.00e+00	756.00
IUUC-Olo-080765	Oryza longistaminata	63.23	6.00e-172	596.00
IUUC-Ome-081704	Oryza meridionalis	70.70	0.00e+00	680.00
IUUC-Oni-082520	Oryza nivara	66.84	2.00e-140	491.00
IUUC-Opu-083443	Oryza punctata	63.28	6.00e-169	586.00
IUUC-Oru-085261	Oryza rufipogon	71.11	0.00e+00	681.00
IUUC-Osa-085322	Oryza sativa	76.64	0.00e+00	646.00
IUUC-Olu-087584	Ostreococcus lucimarinus	42.80	1.00e-58	219.00
IUUC-Ppa-095582	Physcomitrella patens	60.91	0.00e+00	688.00
IUUC-Ppe-102081	Prunus persica	86.71	0.00e+00	988.00
IUUC-Sja-107916	Schizosaccharomyces japonicus	31.79	2.00e-11	63.50
IUUC-Smo-109376	Selaginella moellendorffii	61.54	0.00e+00	637.00
IUUC-Sit-109719	Setaria italica	76.83	0.00e+00	780.00
IUUC-Sly-111887	Solanum lycopersicum	82.46	0.00e+00	944.00
IUUC-Stu-112706	Solanum tuberosum	81.18	0.00e+00	903.00
IUUC-Sbi-114347	Sorghum bicolor	77.31	0.00e+00	788.00
IUUC-Tca-121160	Theobroma cacao	89.35	0.00e+00	947.00
IUUC-Tae-125137	Triticum aestivum	75.68	0.00e+00	792.00
IUUC-Tur-126740	Triticum urartu	66.55	2.00e-88	319.00
IUUC-Tme-126915	Tuber melanosporum	30.07	5.00e-41	162.00
IUUC-Vvi-131478	Vitis vinifera	88.41	0.00e+00	978.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence