iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048044

Ensembl Protein ID

ENSSTOP00000022454.1

UniProt Accession

I3NDK7; I3NDK7_ICTTR

Genbank Protein ID

ENSSTOP00000022454

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01093556

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000023752.1	ENSSTOT00000027118.1	ENSSTOP00000022454.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	30.7	556	597

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 556  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 597
           9*******5554499****************......**********8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MENSDSNDKG SGDQSAAQRR SQMDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEST 60
EEELLRRLQQ IKEGPPPQNA DENRGGDSSD DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGGACGCG GCATCATCAC TTCCTGTTGT GGGCAGTCGT TTCCTGTCGC TGCTTGGTAA 60
CAATGGGGAA GATAATGGCT GCCTGAGCAA CGTCTCGGAG CAGGCGCTGG GGTAGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0008270--F:zinc ion binding
GO:0060816--P:random inactivation of X chromosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000316	Aegilops tauschii	42.37	5.00e-10	57.00
IUUC-Aml-001407	Ailuropoda melanoleuca	94.85	0.00e+00	703.00
IUUC-Atr-002539	Amborella trichopoda	47.54	1.00e-14	73.90
IUUC-Apl-003969	Anas platyrhynchos	75.77	0.00e+00	787.00
IUUC-Aca-005377	Anolis carolinensis	69.03	5.00e-144	504.00
IUUC-Bta-013113	Bos taurus	95.26	0.00e+00	728.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	3.00e-14	72.00
IUUC-Bol-015085	Brassica oleracea	41.94	5.00e-16	78.20
IUUC-Bra-018013	Brassica rapa	42.86	2.00e-16	79.30
IUUC-Cja-018860	Callithrix jacchus	94.76	0.00e+00	681.00
IUUC-Cfa-020358	Canis familiaris	95.08	0.00e+00	706.00
IUUC-Cpo-021533	Cavia porcellus	94.19	0.00e+00	637.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	9.00e-14	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	93.21	0.00e+00	655.00
IUUC-Cho-024536	Choloepus hoffmanni	87.56	1.00e-175	608.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	1.00e-10	61.60
IUUC-Dre-027894	Danio rerio	56.06	1.00e-107	383.00
IUUC-Dno-029606	Dasypus novemcinctus	95.90	0.00e+00	753.00
IUUC-Dor-031042	Dipodomys ordii	87.25	0.00e+00	647.00
IUUC-Ete-033099	Echinops telfairi	89.82	0.00e+00	657.00
IUUC-Eca-033976	Equus caballus	95.46	0.00e+00	754.00
IUUC-Eeu-034964	Erinaceus europaeus	87.90	0.00e+00	773.00
IUUC-Fca-035662	Felis catus	95.08	0.00e+00	706.00
IUUC-Fal-036996	Ficedula albicollis	78.59	2.00e-159	555.00
IUUC-Gmo-039207	Gadus morhua	76.03	2.00e-47	182.00
IUUC-Gga-040816	Gallus gallus	75.90	0.00e+00	792.00
IUUC-Gma-043292	Glycine max	47.37	3.00e-16	79.30
IUUC-Ggo-044754	Gorilla gorilla	95.70	0.00e+00	718.00
IUUC-Hsa-045776	Homo sapiens	95.70	0.00e+00	718.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Lch-050178	Latimeria chalumnae	67.95	0.00e+00	658.00
IUUC-Lpe-051680	Leersia perrieri	42.86	1.00e-14	74.30
IUUC-Loc-052124	Lepisosteus oculatus	58.17	1.00e-105	377.00
IUUC-Laf-054328	Loxodonta africana	95.46	0.00e+00	717.00
IUUC-Mcc-054739	Macaca mulatta	95.93	0.00e+00	721.00
IUUC-Meu-056359	Macropus eugenii	75.28	3.00e-149	521.00
IUUC-Mtr-058167	Medicago truncatula	47.37	2.00e-15	76.60
IUUC-Mga-059838	Meleagris gallopavo	76.38	0.00e+00	795.00
IUUC-Mmr-060608	Microcebus murinus	93.75	0.00e+00	705.00
IUUC-Mdo-061961	Monodelphis domestica	76.34	1.00e-154	539.00
IUUC-Mmu-064278	Mus musculus	87.44	9.00e-170	589.00
IUUC-Mac-065396	Musa acuminata	43.42	1.00e-14	73.20
IUUC-Mpu-066258	Mustela putorius furo	94.00	4.00e-165	574.00
IUUC-Mlu-066930	Myotis lucifugus	94.56	0.00e+00	753.00
IUUC-Nle-069311	Nomascus leucogenys	95.48	0.00e+00	716.00
IUUC-Opr-071124	Ochotona princeps	77.16	9.00e-119	420.00
IUUC-Oan-073036	Ornithorhynchus anatinus	75.18	8.00e-152	530.00
IUUC-Ocu-073795	Oryctolagus cuniculus	91.86	0.00e+00	906.00
IUUC-Oba-075403	Oryza barthii	42.86	1.00e-14	73.90
IUUC-Obr-076503	Oryza brachyantha	42.86	2.00e-14	73.60
IUUC-Ogl-077574	Oryza glaberrima	42.86	1.00e-14	73.90
IUUC-Ogu-077986	Oryza glumaepatula	42.86	1.00e-14	73.90
IUUC-Oin-079091	Oryza indica	42.86	1.00e-14	73.90
IUUC-Ome-081627	Oryza meridionalis	42.86	1.00e-14	74.30
IUUC-Oni-082260	Oryza nivara	42.86	1.00e-14	73.90
IUUC-Opu-083578	Oryza punctata	42.86	1.00e-14	74.30
IUUC-Oru-084794	Oryza rufipogon	42.86	1.00e-14	73.90
IUUC-Osa-085348	Oryza sativa	42.86	1.00e-14	73.90
IUUC-Oga-088022	Otolemur garnettii	95.13	0.00e+00	739.00
IUUC-Oar-089348	Ovis aries	95.02	0.00e+00	720.00
IUUC-Ptr-090604	Pan troglodytes	95.25	0.00e+00	717.00
IUUC-Pan-092322	Papio anubis	95.93	0.00e+00	721.00
IUUC-Psi-093936	Pelodiscus sinensis	73.13	0.00e+00	734.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	1.00e-16	80.90
IUUC-Pab-098671	Pongo abelii	95.48	0.00e+00	715.00
IUUC-Pop-099808	Populus trichocarpa	45.95	7.00e-16	77.80
IUUC-Pca-100263	Procavia capensis	93.29	0.00e+00	694.00
IUUC-Ppe-101202	Prunus persica	43.59	2.00e-15	77.00
IUUC-Pva-102709	Pteropus vampyrus	93.20	0.00e+00	663.00
IUUC-Ptt-103976	Puccinia triticina	43.75	1.00e-10	59.30
IUUC-Rno-105759	Rattus norvegicus	89.57	4.00e-176	610.00
IUUC-Sha-106792	Sarcophilus harrisii	76.89	5.00e-139	488.00
IUUC-Smo-109572	Selaginella moellendorffii	44.09	1.00e-15	75.90
IUUC-Sit-109852	Setaria italica	42.86	1.00e-14	73.90
IUUC-Sly-111747	Solanum lycopersicum	62.86	1.00e-12	67.40
IUUC-Stu-112609	Solanum tuberosum	47.22	1.00e-16	80.10
IUUC-Sar-113271	Sorex araneus	85.14	2.00e-176	612.00
IUUC-Sbi-114435	Sorghum bicolor	42.86	2.00e-14	73.90
IUUC-Ssc-115738	Sus scrofa	95.30	0.00e+00	741.00
IUUC-Tgu-117205	Taeniopygia guttata	75.90	0.00e+00	775.00
IUUC-Tsy-119421	Tarsius syrichta	96.42	0.00e+00	780.00
IUUC-Tca-121367	Theobroma cacao	47.37	2.00e-16	79.70
IUUC-Tae-124344	Triticum aestivum	43.06	1.00e-12	66.20
IUUC-Tur-126084	Triticum urartu	42.86	2.00e-13	72.00
IUUC-Tbe-127543	Tupaia belangeri	93.11	0.00e+00	999.00
IUUC-Vpa-130058	Vicugna pacos	95.75	0.00e+00	713.00
IUUC-Vvi-131093	Vitis vinifera	47.37	1.00e-16	80.50
IUUC-Xtr-132663	Xenopus tropicalis	62.02	7.00e-110	390.00
IUUC-Yli-134448	Yarrowia lipolytica	34.12	4.00e-10	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence