iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014040

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000883

Gene Name

LOC100823108; BRADI_4g29540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G29540	BRADI4G29540.1	BRADI4G29540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-16	60.5	54	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            p+eflCpI + lM dPv+lpsG+ty+r++++ + + +    P t++    + ++Pn +l++ i  wc++++
   Q: 54   APPEFLCPILGALMADPVILPSGQTYERACLQACKELSF-FPPGTGSGS--DAMIPNSALKAAIGTWCARSG 122
           69*******************************955444.478888765..888**************9876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGATRPRRWR LPFQRSAPSS PSSKSFPAPY SPALSAAAAA SEAEPKGEQQ EEAAPPEFLC 60
PILGALMADP VILPSGQTYE RACLQACKEL SFFPPGTGSG SDAMIPNSAL KAAIGTWCAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCGA CGCGTCCCCG GCGCTGGAGG CTGCCCTTCC AACGCAGCGC CCCTTCATCC 60
CCGTCGTCCA AGTCGTTCCC CGCCCCCTAC TCGCCTGCCT TGTCCGCAGC TGCGGCGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100823108

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050705	Leersia perrieri	71.57	5.00e-140	490.00
IUUC-Oba-075532	Oryza barthii	77.84	6.00e-138	483.00
IUUC-Ogl-077576	Oryza glaberrima	70.47	1.00e-142	499.00
IUUC-Ogu-078801	Oryza glumaepatula	73.54	3.00e-144	504.00
IUUC-Oin-080208	Oryza indica	71.43	6.00e-146	509.00
IUUC-Ome-081170	Oryza meridionalis	75.31	2.00e-137	481.00
IUUC-Oni-082195	Oryza nivara	75.49	4.00e-137	480.00
IUUC-Opu-083643	Oryza punctata	75.98	6.00e-140	489.00
IUUC-Oru-084355	Oryza rufipogon	75.31	1.00e-144	506.00
IUUC-Osa-086173	Oryza sativa	75.31	1.00e-144	506.00
IUUC-Sit-110079	Setaria italica	68.05	5.00e-144	503.00
IUUC-Sbi-114055	Sorghum bicolor	76.66	7.00e-95	340.00
IUUC-Tae-123319	Triticum aestivum	81.55	6.00e-180	623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence