iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114055

UUCD1 version

UUC-SoB-00494

Ensembl Protein ID

Sb02g023920.1

UniProt Accession

A0A1B6QLI4; A0A1B6QLI4_SORBI

Genbank Protein ID

KXG38773.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G277700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g023920	Sb02g023920.1	Sb02g023920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.70e-17	61.8	45	114

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vpeeflCp+s+ lM dPv+lpsG t++r++++ + +      P   +    ++l+Pn +l++ i  wc++++
   Q: 45   VPEEFLCPLSGALMADPVILPSGKTFERACLQACADLAFL--PPGVEDGGADTLIPNAALKAAIGTWCARSG 114
           8*********************************887776..99999999******************9876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGAARPRRWK LPFHRTSSAS AAPPPPPPGH ASPARSEAWA AAEAVPEEFL CPLSGALMAD 60
PVILPSGKTF ERACLQACAD LAFLPPGVED GGADTLIPNA ALKAAIGTWC ARSGRAVPAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGCGG CGCGTCCGCG GCGCTGGAAG CTGCCGTTCC ACCGCACCAT CAGCGCCGCG 60
GCCGGAGGAG GCGGCGGCAG CAGCAGCGCG CCGTGCTCGC CCTCGTCCAG GTCGTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo

PROSITE

PS50176--ARM_REPEAT

SMART

SM00185--ARM

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	46.01	1.00e-51	196.00
IUUC-Aly-005887	Arabidopsis lyrata	43.43	3.00e-51	195.00
IUUC-Ath-007165	Arabidopsis thaliana	41.75	6.00e-53	201.00
IUUC-Bdi-014040	Brachypodium distachyon	66.84	7.00e-152	529.00
IUUC-Bra-017987	Brassica rapa	34.78	5.00e-64	238.00
IUUC-Lpe-050705	Leersia perrieri	68.47	3.00e-148	517.00
IUUC-Mtr-057660	Medicago truncatula	45.39	4.00e-46	178.00
IUUC-Oba-075532	Oryza barthii	72.47	2.00e-144	504.00
IUUC-Ogl-077576	Oryza glaberrima	67.77	3.00e-150	524.00
IUUC-Ogu-078801	Oryza glumaepatula	70.45	1.00e-151	528.00
IUUC-Oin-080208	Oryza indica	70.63	3.00e-152	530.00
IUUC-Ome-081170	Oryza meridionalis	70.05	3.00e-144	504.00
IUUC-Oni-082195	Oryza nivara	70.12	4.00e-142	497.00
IUUC-Opu-083643	Oryza punctata	70.05	5.00e-146	510.00
IUUC-Oru-084355	Oryza rufipogon	70.63	4.00e-152	530.00
IUUC-Osa-086173	Oryza sativa	70.63	4.00e-152	530.00
IUUC-Pop-099183	Populus trichocarpa	46.32	4.00e-46	178.00
IUUC-Sit-110079	Setaria italica	76.68	2.00e-180	624.00
IUUC-Sly-111131	Solanum lycopersicum	36.31	4.00e-71	261.00
IUUC-Stu-112864	Solanum tuberosum	36.12	5.00e-71	260.00
IUUC-Tca-121304	Theobroma cacao	41.89	2.00e-52	199.00
IUUC-Tae-123319	Triticum aestivum	69.76	2.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence