iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017254

Ensembl Protein ID

Bra032521.1-P

UniProt Accession

M4EUN9; M4EUN9_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra032521	Bra032521.1	Bra032521.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.80e-16	60.1	84	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrtlt...........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           + vkvs++g+++++++dl+ + +++dLlka++ +            ++k+s++ ++YeD+dGD++ l +D++++++        +++rl+i+k
   Q: 84   IYVKVSMDGAPYLRKIDLSCYKGYSDLLKALELMFefsvgeyserdGYKGSDFVPTYEDKDGDWM-LIGDVPWEMFEC------NCKRLRIMK 169
           78*******************************4447799999999*******************.*********999......9******98 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MDEFVNLKAT ELRLGLPGTN NVCEERVSCN SNNNKRALQA DAENETETSP PRKTQIVGWP 60
PVRSYRKNNV QTKKNESDGE SQGIYVKVSM DGAPYLRKID LSCYKGYSDL LKALELMFEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAGT TTGTTAACCT AAAGGCAACG GAGCTGAGGC TGGGATTACC AGGAACAAAC 60
AATGTATGTG AAGAAAGAGT TTCTTGCAAT AGTAATAACA ATAAGAGAGC ATTACAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	44.44	6.00e-37	146.00
IUUC-Aly-005805	Arabidopsis lyrata	81.58	6.00e-84	302.00
IUUC-Aor-010084	Aspergillus oryzae	31.15	4.40e+00	25.00
IUUC-Bci-013911	Botrytis cinerea	34.21	1.80e-01	29.60
IUUC-Ncr-068890	Neurospora crassa	35.85	2.90e-01	29.30
IUUC-Ogu-078093	Oryza glumaepatula	50.00	1.00e-44	172.00
IUUC-Oin-079780	Oryza indica	50.00	5.00e-45	173.00
IUUC-Oni-083078	Oryza nivara	50.00	5.00e-45	173.00
IUUC-Oru-084991	Oryza rufipogon	50.00	5.00e-45	173.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence