iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__4001__AT1G49040.1	fgenesh2_kg.1__4001__AT1G49040.1	fgenesh2_kg.1__4001__AT1G49040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-31	106.2	937	974
UBD/Beta-Prp	1.90e-53	182.2	866	1032

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH + v+c++  s+ +++++++Dgt+k+WD+rt+ ++ 
   Q: 937  GHDSQVSCVKMlSGERVLTAAHDGTVKMWDVRTDMCVA 974
           8*********98889*******************9975 PP

UBD/Beta-Prp

   S: 63   dgkilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           d+ ++++gs+D ++k+wd+s   ++   tlkgh+ +v+++s+++   k+vsGs+d+ + vwd +t q le  l+g
   Q: 866  DAGFFISGSTDCLVKIWDPSlrGSELRATLKGHTGTVRAISSDR--GKIVSGSDDQSVIVWDKQTTQLLE-ELKG 937
           4459*************766669*********************..***********************9.**** PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           hd+ v+cv++ + g  + +++ D+tv++Wd++t+ ++ t      +++ sl++d++   l+++++d+  ++wd++
   Q: 938  HDSQVSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGR-CSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
           **********99.99*************************66.99****************************** PP
   S: 211  tgecvrtlnghtdnvksvrfsp 232
           +g+ +++l+ght++++s+r+ +
   Q: 1011 SGKQMHKLKGHTKWIRSIRMVE 1032
           ******************9875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGRIFEYFVV CGLGPEIRTV DGDLGFHGMQ TFYLPALLDQ FPPTDQSPYP APPPQLPTCV 60
LPAGVEFHSS GFVSSDPASF PRSYPIVLTE GDGSKIFVSC IAFRDRVCED IIEAYRLPPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAACGACTT GGATAAAAAA ACAAAGGAGC CCGAATTGAA GCAACTACTT TTCTCCATCA 60
TCGACGAAAT CCGCCAAAAT TGATCTCACG TTGAAAACCC AGATCATGCA CTAGAACCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

Gene Ontology

GO:0030136--C:clathrin-coated vesicle
GO:0005886--C:plasma membrane
GO:0010235--P:guard mother cell cytokinesis
GO:0009825--P:multidimensional cell growth
GO:0045824--P:negative regulation of innate immune response

KEGG

aly:ARALYDRAFT_474047

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	72.33	0.00e+00	1662.00
IUUC-Ath-007614	Arabidopsis thaliana	98.06	0.00e+00	2308.00
IUUC-Bgr-012075	Blumeria graminis	31.74	8.00e-28	118.00
IUUC-Bdi-014863	Brachypodium distachyon	70.45	0.00e+00	1668.00
IUUC-Bol-015997	Brassica oleracea	93.27	0.00e+00	2193.00
IUUC-Bra-017065	Brassica rapa	93.27	0.00e+00	2194.00
IUUC-Gma-042682	Glycine max	73.64	0.00e+00	1764.00
IUUC-Hvu-047377	Hordeum vulgare	79.75	4.00e-152	529.00
IUUC-Lpe-051109	Leersia perrieri	69.76	0.00e+00	1570.00
IUUC-Mor-057076	Magnaporthe oryzae	31.88	2.00e-28	119.00
IUUC-Mpo-057423	Magnaporthe poae	26.39	1.00e-27	117.00
IUUC-Mtr-058651	Medicago truncatula	73.09	0.00e+00	1748.00
IUUC-Mac-065420	Musa acuminata	72.39	0.00e+00	1731.00
IUUC-Ncr-068688	Neurospora crassa	26.91	5.00e-28	119.00
IUUC-Oba-075961	Oryza barthii	67.18	0.00e+00	1220.00
IUUC-Obr-076806	Oryza brachyantha	70.76	0.00e+00	1672.00
IUUC-Ogu-078716	Oryza glumaepatula	66.58	0.00e+00	1511.00
IUUC-Oin-079809	Oryza indica	59.24	0.00e+00	1262.00
IUUC-Olo-080386	Oryza longistaminata	66.56	0.00e+00	1575.00
IUUC-Ome-081107	Oryza meridionalis	68.52	0.00e+00	1591.00
IUUC-Oni-082213	Oryza nivara	64.63	0.00e+00	1457.00
IUUC-Opu-083850	Oryza punctata	65.98	0.00e+00	1447.00
IUUC-Oru-084982	Oryza rufipogon	68.80	0.00e+00	1527.00
IUUC-Osa-086141	Oryza sativa	70.85	0.00e+00	1647.00
IUUC-Olu-087744	Ostreococcus lucimarinus	31.23	4.00e-37	149.00
IUUC-Ppa-095259	Physcomitrella patens	53.01	0.00e+00	1227.00
IUUC-Pop-099233	Populus trichocarpa	76.89	0.00e+00	1818.00
IUUC-Ppe-101883	Prunus persica	73.36	0.00e+00	1426.00
IUUC-Smo-109566	Selaginella moellendorffii	56.92	0.00e+00	1346.00
IUUC-Sit-109736	Setaria italica	71.36	0.00e+00	1699.00
IUUC-Sly-111483	Solanum lycopersicum	72.84	0.00e+00	1750.00
IUUC-Sbi-113820	Sorghum bicolor	71.36	0.00e+00	1692.00
IUUC-Sre-114901	Sporisorium reilianum	30.51	1.00e-27	118.00
IUUC-Tca-121657	Theobroma cacao	76.88	0.00e+00	1814.00
IUUC-Tae-124598	Triticum aestivum	69.17	0.00e+00	1658.00
IUUC-Tur-126080	Triticum urartu	68.84	0.00e+00	1070.00
IUUC-Uma-129449	Ustilago maydis	31.11	1.00e-28	122.00
IUUC-Vvi-131550	Vitis vinifera	76.07	0.00e+00	1781.00
IUUC-Yli-134429	Yarrowia lipolytica	34.51	1.00e-33	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence