iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121657

Ensembl Protein ID

EOY20983

UniProt Accession

A0A061FV61; A0A061FV61_THECC

Genbank Protein ID

EOY20983.1

Protein Name

Stomatal cytokinesis defective / SCD1 protein (SCD1) isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_012299

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_012299	EOY20983	EOY20983
TCM_012299	EOY20984	EOY20984

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-33	112.9	944	981
UBD/Beta-Prp	1.00e-68	232.7	843	1038

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH + v+c++  s+ +++++++Dgt+k+WD+rt++++ 
   Q: 944  GHDAQVSCVQMlSGERVLTSAHDGTVKMWDVRTDTCVA 981
           8*********98889********************985 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgk............ilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcl 129
           +r l gh+++vta+ +  +++            ++++gs+D  +k+wd+s   ++   tlkgh+++++++s+++   k+vsGs+d+ + vwd +t q l
   Q: 843  VRILRGHTGAVTALHCVTRREvwdlvgdredagFFISGSTDCSVKIWDPSlrGSELRTTLKGHTRTIRAISSDR--GKVVSGSDDQSVIVWDKQTSQLL 939
           666777777744444444444444444444457**************766669*********************..*********************** PP
   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksv 228
           e  l+ghd+ v+cv++ + g  + +++ D+tv++Wd++t++++ t      ++v ++++d++   l+++++d   ++wd+++g+ +++l ght++++s+
   Q: 940  E-ELKGHDAQVSCVQMLS-GERVLTSAHDGTVKMWDVRTDTCVATVGR-CSSAVLCMEYDDSTGILAAAGRDAVANIWDIRAGRQMHKLLGHTKWIRSI 1035
           9.**************99.999************************66.99************************************************ PP
   S: 229  rfs 231
           r++
   Q: 1036 RMD 1038
           987 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MARIFEYFVV CGLGPEIRTL DGTKGYHGTE YMYLPSLLDQ YPPPNHSLYP PPPPQLPTCV 60
LPAGVEFYSS GFDSNDPSTY PRSYPIVLTE GDGSKIYVSC IAFRDPVSED IAEAYRIPTN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCTTCAAC AGAAGATGAG ACTTTAATCA ATATCTTAAC CAAAAGATCA AGAATTTATG 60
ATTGAGATTA TTGATAAAAT TCAAGACTCA ACATTAAAAA GGGAATACCT TGAAAAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	79.36	0.00e+00	1836.00
IUUC-Aly-005508	Arabidopsis lyrata	76.96	0.00e+00	1811.00
IUUC-Ath-007614	Arabidopsis thaliana	77.13	0.00e+00	1861.00
IUUC-Bgr-012075	Blumeria graminis	29.58	5.00e-29	122.00
IUUC-Bdi-014863	Brachypodium distachyon	75.35	0.00e+00	1797.00
IUUC-Bol-015997	Brassica oleracea	77.54	0.00e+00	1825.00
IUUC-Bra-017065	Brassica rapa	77.54	0.00e+00	1823.00
IUUC-Cme-027168	Cyanidioschyzon merolae	27.17	4.00e-20	92.80
IUUC-Ggr-039781	Gaeumannomyces graminis	27.39	1.00e-28	120.00
IUUC-Gma-042682	Glycine max	82.86	0.00e+00	1977.00
IUUC-Hvu-047377	Hordeum vulgare	84.49	1.00e-164	571.00
IUUC-Lpe-051109	Leersia perrieri	74.49	0.00e+00	1694.00
IUUC-Mtr-058651	Medicago truncatula	81.47	0.00e+00	1951.00
IUUC-Mac-065420	Musa acuminata	78.55	0.00e+00	1868.00
IUUC-Oba-075961	Oryza barthii	66.31	0.00e+00	1437.00
IUUC-Obr-076806	Oryza brachyantha	75.85	0.00e+00	1818.00
IUUC-Ogu-078716	Oryza glumaepatula	71.33	0.00e+00	1642.00
IUUC-Oin-079809	Oryza indica	65.82	0.00e+00	1474.00
IUUC-Olo-080386	Oryza longistaminata	71.23	0.00e+00	1708.00
IUUC-Ome-081107	Oryza meridionalis	73.31	0.00e+00	1722.00
IUUC-Oni-082213	Oryza nivara	69.11	0.00e+00	1585.00
IUUC-Opu-083850	Oryza punctata	70.80	0.00e+00	1576.00
IUUC-Oru-084982	Oryza rufipogon	74.30	0.00e+00	1672.00
IUUC-Osa-086141	Oryza sativa	76.11	0.00e+00	1790.00
IUUC-Olu-087744	Ostreococcus lucimarinus	34.15	2.00e-45	177.00
IUUC-Ppa-095259	Physcomitrella patens	55.37	0.00e+00	1301.00
IUUC-Pop-099233	Populus trichocarpa	85.76	0.00e+00	2027.00
IUUC-Ppe-101883	Prunus persica	81.58	0.00e+00	1588.00
IUUC-Smo-109566	Selaginella moellendorffii	59.59	0.00e+00	1435.00
IUUC-Sit-109736	Setaria italica	76.34	0.00e+00	1829.00
IUUC-Sly-111483	Solanum lycopersicum	81.40	0.00e+00	1932.00
IUUC-Sbi-113820	Sorghum bicolor	76.01	0.00e+00	1821.00
IUUC-Tae-124598	Triticum aestivum	74.45	0.00e+00	1818.00
IUUC-Tur-126080	Triticum urartu	72.65	0.00e+00	1144.00
IUUC-Vvi-131550	Vitis vinifera	85.60	0.00e+00	1993.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence