iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114796

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G429700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g046160	Sb03g046160.1	Sb03g046160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-07	30.9	42	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++  ++  lv +C H+++ +C+ +w     s +++ +CP C+
   Q: 42   CAICLDRIalQETALVKGCDHAYCVTCILRW----ASYKQNPLCPQCK 85
           ********9955588999*************....8889999*****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAAASSSS EGPVAVSTCV SLGEAAAAPG GGDRAAADCG VCAICLDRIA LQETALVKGC 60
DHAYCVTCIL RWASYKQNPL CPQCKHPFEF LSVHRSLDGC LHDYLFEESV CLLLRAAWFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCGTTCGC GAAGGCCCCC CTTCCTCTCC TCACATCCAC TCCTCCCTTC CCTTCACCGA 60
CCGACCGACC GAACCGACCC CGGAAGCTCT CGCCCGGTCG CCTCCCTCCT CCCGATCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001781--Znf_LIM
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_03g046160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002853	Amborella trichopoda	55.29	4.00e-46	176.00
IUUC-Aly-006143	Arabidopsis lyrata	60.76	2.00e-49	188.00
IUUC-Ath-007240	Arabidopsis thaliana	59.87	6.00e-50	189.00
IUUC-Bdi-014704	Brachypodium distachyon	72.84	4.00e-56	210.00
IUUC-Bol-015356	Brassica oleracea	56.95	1.00e-46	178.00
IUUC-Cpo-021419	Cavia porcellus	35.00	2.00e-07	51.20
IUUC-Cre-022875	Chlamydomonas reinhardtii	64.56	1.00e-26	110.00
IUUC-Csa-023947	Chlorocebus sabaeus	34.48	9.00e-06	45.80
IUUC-Cho-024396	Choloepus hoffmanni	36.67	1.00e-07	52.00
IUUC-Dno-029714	Dasypus novemcinctus	39.58	8.00e-06	46.20
IUUC-Hsa-046200	Homo sapiens	34.48	8.00e-07	44.70
IUUC-Lpe-050939	Leersia perrieri	79.83	7.00e-71	259.00
IUUC-Mlu-067644	Myotis lucifugus	36.67	2.00e-07	51.20
IUUC-Oan-073333	Ornithorhynchus anatinus	31.15	5.00e-06	43.10
IUUC-Oba-075008	Oryza barthii	76.79	2.00e-66	244.00
IUUC-Obr-076867	Oryza brachyantha	76.76	4.00e-71	260.00
IUUC-Ogl-077681	Oryza glaberrima	77.23	4.00e-67	246.00
IUUC-Ogu-078356	Oryza glumaepatula	77.23	4.00e-67	246.00
IUUC-Oin-079949	Oryza indica	77.23	4.00e-67	246.00
IUUC-Olo-080990	Oryza longistaminata	76.79	2.00e-66	244.00
IUUC-Ome-081618	Oryza meridionalis	77.68	1.00e-67	248.00
IUUC-Oni-082491	Oryza nivara	77.23	4.00e-67	246.00
IUUC-Opu-083979	Oryza punctata	69.01	1.00e-66	244.00
IUUC-Osa-085324	Oryza sativa	77.23	4.00e-67	246.00
IUUC-Olu-087720	Ostreococcus lucimarinus	33.55	7.00e-13	66.60
IUUC-Pop-099205	Populus trichocarpa	58.93	1.00e-55	208.00
IUUC-Ppe-101850	Prunus persica	68.26	2.00e-56	211.00
IUUC-Spo-108196	Schizosaccharomyces pombe	35.09	2.00e-05	42.40
IUUC-Sit-110148	Setaria italica	90.68	9.00e-71	259.00
IUUC-Sly-110879	Solanum lycopersicum	63.86	2.00e-55	207.00
IUUC-Stu-112540	Solanum tuberosum	63.25	5.00e-55	206.00
IUUC-Tca-121633	Theobroma cacao	67.07	1.00e-55	208.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence