iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076351

Ensembl Protein ID

OB08G28040.1

UniProt Accession

J3MUM3; J3MUM3_ORYBR

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB08G28040	OB08G28040.1	OB08G28040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.70e-154	513.0	2273	2892

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.kskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           G+ N gNtCY+N+++QcL+ ++ lr ++l           p+ pkg + ++l+ lfe     ++++  +p++ll++l+++++ f g++ qD++E+
   Q: 2273 GIPNRGNTCYVNALVQCLLVLERLRAAMLG----------PDAPKGIIGNTLRYLFEDADnVNNTGLLDPTQLLACLRMLNSGFVGTSMQDSHEV 2357
           9*****************************..........467899*************88999******************************* PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke..... 185
           l++l d+l++e               +  + s++++  +    +s+i+ +F+ q++ +  c++c  +s++ + f dls+p+p+k+ + ++     
   Q: 2358 LCCLRDGLDREE--------------SIMKPSNIQDGAPSAVDPSVINSTFGSQISITRSCKRCSFRSVSCDVFHDLSVPLPSKTFSVESppwtn 2438
           **********99..............223444566778999999*****************************************877669**** PP
   S: 186  ............................................................................................... 185
                                                                                                          
   Q: 2439 kghrsqrkirinlfpaiekqkrdnektckiaergdsqspaseledvvmvkeseplkvdssqveqisqskdavkvvdvhpqevlydvkveiadata 2533
           *********************************************************************************************** PP
   S: 186  .........................................................................slqdcLesftkeeelegenkyy 207
                                                                                    s+++cL+  +++e++e    + 
   Q: 2534 aescipedlapplpplvslvrednarietgsdvdkndivvqpevsteevtteykgktkwdviydkaqdinslaSIEECLKLHFEAEMIE----WA 2624
           ****************************************************************************************9....** PP
   S: 208  cekck.......................................................................................... 212
           c +c                                                                                           
   Q: 2625 CGNCSkvgeqneqsekiscqseqssnlnrlevertssssefhgsdsqhqamltvdsitkgisgkqdlasddiddkksechegvqegtpscapadq 2719
           **************************************************************************999999999999999999999 PP
   S: 213  ............................kkqe.....aekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts....... 267
                                       +  +     a +++ ++kl++vL++hL R         ++k+  +v f++ Ld+  f+         
   Q: 2720 nvstqdedkgkqvkldhsaqqveenqndQ--KdkndgAIQTCLIRKLSPVLVIHLIRS-----LLGPHKVIGHVRFKEILDMGLFMDPrskqgdn 2807
           99999999988888888777776665551..055666*********************.....56789****************99995555555 PP
   S: 268  .........peekqkekkkYeLiavvvHsG.slssGHYvayvkn.......ekgk..WllfdDskVtevkeeevleetgstaYvlfYkrr 338
                    +++++k + +Y+L++vv H G + + GH+vayv+           +  W++ +D++++e++ eevl+   ++aY+lfY+r+
   Q: 2808 vndsavfygKSSEDKANSSYRLVGVVEHLGqGNDAGHFVAYVRPshpeqtsG--SssWFRASDENIREISLEEVLK---CEAYLLFYERM 2892
           5555555554444444****************************66654333..166*******************...*********96 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDNERRTRAT ARVRDIAKAK GRSPHPRWSA AATEAGSGAA AAAAAALDTS NLWAQAAALT 60
GDGGSIRWCQ HVLCEQAVID VGIELIKTSV DGPMCNAYKC GATEGRNILV CLGCESSFCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAACG AGAGGAGGAC GAGGGCGACG GCGAGGGTGC GGGATATTGC CAAGGCCAAG 60
GGGAGATCCC CACACCCGAG GTGGTCAGCT GCAGCGACGG AGGCCGGTTC TGGAGCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051578	Leersia perrieri	43.09	0.00e+00	757.00
IUUC-Oba-075843	Oryza barthii	45.96	0.00e+00	1061.00
IUUC-Ogl-077545	Oryza glaberrima	63.71	0.00e+00	863.00
IUUC-Ogu-078457	Oryza glumaepatula	63.71	0.00e+00	866.00
IUUC-Oin-079987	Oryza indica	63.58	0.00e+00	860.00
IUUC-Olo-080614	Oryza longistaminata	63.93	0.00e+00	853.00
IUUC-Ome-081341	Oryza meridionalis	50.73	0.00e+00	768.00
IUUC-Oni-082972	Oryza nivara	63.45	0.00e+00	859.00
IUUC-Opu-083455	Oryza punctata	51.11	0.00e+00	736.00
IUUC-Oru-085100	Oryza rufipogon	62.48	0.00e+00	766.00
IUUC-Osa-085905	Oryza sativa	63.45	0.00e+00	857.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence