iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075889

Ensembl Protein ID

OBART08G21220.1

UniProt Accession

A0A0D3H2E1; A0A0D3H2E1_9ORYZ

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART08G21220	OBART08G21220.1	OBART08G21220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.60e-39	135.2	169	648

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           G+ NlgNtCY+NS+LQcL+ +  lr  +l      l+      p g l +sl++lf      ++  +  +p++ll +++++++ef+g+  +D+q
   Q: 169  GIPNLGNTCYLNSLLQCLLVLGRLRAGILG-----LD-----APLGLLGSSLRSLFDDADsvNNAGGLLDPEKLLXCVRMLNPEFKGNGMHDSQ 252
           9*****************************.....43.....4688999*******99977799999*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.. 185
           E l++l  +l++e               +  +ls+++   +    +++i+ +F+gql+ +  c++c  +s +++ f dls+p+p+ke+ +k+  
   Q: 253  EALCILRTGLDKEE--------------RAMKLSNMQAGAPSAVAPTVIDSIFGGQLSVTSSCKHCSVRSLSHDVFHDLSVPLPQKESPAKSve 332
           ************99..............34567788889999*********************************************99999** PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 333  lspwtkghrsprkirikllsaidkhksdnekthkisergdsqspaseledvflvktskplkvdstkveqishskdaiggplqtrkdkvqgkvvd 426
           ********************************************************************************************** PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 427  alpqkvlcdakvdgmdaatadsripedraspsfvsplseensliasgsdvkindsavqpevsteakmtassakvttkdkgktqisdvvydkahd 520
           ********************************************************************************************** PP
   S: 186  .....slqdcLesftkeeelegenkyycekck..............................kkqe.............aekklklkklPevLi 231
                s+++cLe + ++ee+e    + ce+c                               +                  ++  ++klP+vL+
   Q: 521  inslaSIEKCLELYLETEEIE----WTCENCSkvvekpgimsstkedttagdqseqseksayQ--VeenqneqkdknecPIQTRLIRKLPPVLT 608
           ********************9....*******5666666665555555555555555555550..05555555566666788889********* PP
   S: 232  lhLkRfsfseeqksrekinkkvefpleLdlspfcts........p 268
           +hL+R+      +  +k+  +v+f++ Ld+ +f ++        +
   Q: 609  IHLMRYL-----EDFKKVIGHVSFKEILDVGQFIQDsefegysmQ 648
           ******2.....23469**************99988555555550 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MDEESQPKSP SLERPAAATD ANSGGGYRAR HGRHVLYGED DINLAIELIK TCDDTPMCNA 60
DNCDNTEGRE ISVCLDCESR FCTTHGKWHA SINKHWVALV YKKPHVTYCF ACEECYFIRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGG AGAGCCAGCC GAAATCCCCG AGCCTGGAGC GGCCAGCTGC AGCGACAGAC 60
GCCAATTCCG GCGGCGGCTA CCGTGCTCGG CATGGCCGGC ACGTCTTGTA TGGGGAGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014907	Brachypodium distachyon	42.29	2.00e-90	328.00
IUUC-Ogu-078668	Oryza glumaepatula	89.88	0.00e+00	1585.00
IUUC-Oin-079438	Oryza indica	98.58	0.00e+00	1240.00
IUUC-Olo-080801	Oryza longistaminata	88.06	0.00e+00	1046.00
IUUC-Ome-081940	Oryza meridionalis	87.74	0.00e+00	1004.00
IUUC-Oni-082663	Oryza nivara	87.38	0.00e+00	1642.00
IUUC-Opu-083455	Oryza punctata	86.69	0.00e+00	1067.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence