iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114117

Ensembl Protein ID

Sb04g009720.1

UniProt Accession

C5XZI0; C5XZI0_SORBI

Genbank Protein ID

EES04878.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G116600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g009720	Sb04g009720.1	Sb04g009720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.90e-08	35.4	137	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 11   effahkivLaasSsvFyalflmeleesks.klmveikdvqpevfrallkFlYtgklden 68
            +    ++Laa S++F +lf+++++es++ + +  i d + +++ +ll+F+Y+gkl+ +
   Q: 137  TIYISSAILAAKSPFFFKLFSNGMKESDQrHATLRITDSEETALMELLSFMYSGKLTTT 195
           5677889******************9873034455669*****************9865 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDPDFSPGGG GPSFEFAFNE VNFSDRELRI EVVAGDDDAP GSSGGGAGGG GLADWARHRK 60
RRREELLKEK ESTTHMSDQT SCNGVEAEEC DAYEENQEEP VAMIEESPPD VGQDGDDGQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCGGCCA CACTTCTCTC ATTTCGCCCT CCCCCCCCTC GAGCCCTCCG CCGGCTAGGG 60
TTACGGCCAC CGCCTTCCAC GCCTCCCCCA CTTCCCGTCC AGTAGGCGGC GGGAGGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011705--BACK
IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR008974--TRAF-like

PROSITE

PS50097--BTB

Pfam

PF07707--BACK
PF00651--BTB

SMART

SM00875--BACK
SM00225--BTB

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0016567--P:protein ubiquitination
GO:0010114--P:response to red light

KEGG

sbi:SORBI_04g009720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005367	Anolis carolinensis	27.72	1.00e-11	63.90
IUUC-Bdi-014948	Brachypodium distachyon	92.19	0.00e+00	951.00
IUUC-Dre-027589	Danio rerio	25.10	3.00e-13	69.70
IUUC-Fal-037559	Ficedula albicollis	26.09	4.00e-12	65.50
IUUC-Gmo-039367	Gadus morhua	25.10	2.00e-11	63.50
IUUC-Gac-042413	Gasterosteus aculeatus	30.00	5.00e-16	78.60
IUUC-Lpe-050932	Leersia perrieri	89.28	0.00e+00	874.00
IUUC-Mtr-058665	Medicago truncatula	60.82	0.00e+00	673.00
IUUC-Mac-065293	Musa acuminata	70.09	0.00e+00	716.00
IUUC-Oba-075608	Oryza barthii	88.62	0.00e+00	875.00
IUUC-Obr-076570	Oryza brachyantha	90.50	0.00e+00	810.00
IUUC-Ogl-077069	Oryza glaberrima	88.62	0.00e+00	875.00
IUUC-Ogu-078858	Oryza glumaepatula	88.62	0.00e+00	865.00
IUUC-Oin-079810	Oryza indica	88.62	0.00e+00	865.00
IUUC-Ome-081588	Oryza meridionalis	88.44	0.00e+00	863.00
IUUC-Oni-082737	Oryza nivara	88.62	0.00e+00	865.00
IUUC-Opu-084092	Oryza punctata	88.38	0.00e+00	865.00
IUUC-Oru-084384	Oryza rufipogon	88.62	0.00e+00	865.00
IUUC-Osa-085843	Oryza sativa	88.26	0.00e+00	862.00
IUUC-Sit-110540	Setaria italica	98.48	0.00e+00	932.00
IUUC-Sly-111648	Solanum lycopersicum	66.54	0.00e+00	663.00
IUUC-Stu-112795	Solanum tuberosum	65.70	0.00e+00	669.00
IUUC-Tgu-117035	Taeniopygia guttata	26.09	3.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence