iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006420

Ensembl Protein ID

fgenesh2_kg.267__3__AT3G07360.1

UniProt Accession

D7MX21; D7MX21_ARALL

Genbank Protein ID

EFH38910.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348907

Gene Name

ARALYDRAFT_497366

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.267__3__AT3G07360.1	fgenesh2_kg.267__3__AT3G07360.1	fgenesh2_kg.267__3__AT3G07360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-31	108.9	74	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           +peef+Cp+s+elMrdPvvl+sG+tyd+  I+kwl+sg++tcP+t+q l ++ l+Pnl +r++i++wc++
   Q: 74   CPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKK 143
           79******************************************************************97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IEDEDDFGVQ TIDQLQEALS ALREATMRKM 60
AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD KLFIQKWLSS GNRTCPKTQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTCTCT CTTCCTCATA TAATATTTAT TACTCTCTCT TTCACAAACA CAGAAACAAA 60
ATAAATAAAA AATATAATTA ATGTGAGAAA ATCAATTCAA AAATTTCGAC ATACGTAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_497366

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	45.84	2.00e-86	312.00
IUUC-Ath-007457	Arabidopsis thaliana	97.61	0.00e+00	889.00
IUUC-Bdi-014069	Brachypodium distachyon	51.41	7.00e-106	376.00
IUUC-Bol-015764	Brassica oleracea	88.77	0.00e+00	805.00
IUUC-Bra-017759	Brassica rapa	87.90	0.00e+00	768.00
IUUC-Gma-043804	Glycine max	60.21	3.00e-146	510.00
IUUC-Hvu-047411	Hordeum vulgare	50.55	1.00e-84	305.00
IUUC-Lpe-050825	Leersia perrieri	50.90	2.00e-106	378.00
IUUC-Mtr-057877	Medicago truncatula	57.11	2.00e-142	498.00
IUUC-Mac-065616	Musa acuminata	51.91	1.00e-109	389.00
IUUC-Oba-075311	Oryza barthii	51.72	7.00e-102	363.00
IUUC-Obr-076232	Oryza brachyantha	51.07	1.00e-101	362.00
IUUC-Ogl-077647	Oryza glaberrima	51.52	2.00e-107	381.00
IUUC-Ogu-078448	Oryza glumaepatula	51.52	7.00e-108	383.00
IUUC-Oin-079693	Oryza indica	51.72	1.00e-101	362.00
IUUC-Olo-080462	Oryza longistaminata	51.93	2.00e-107	382.00
IUUC-Ome-081796	Oryza meridionalis	51.93	4.00e-107	380.00
IUUC-Oni-082158	Oryza nivara	51.52	1.00e-107	382.00
IUUC-Opu-084131	Oryza punctata	52.19	5.00e-108	384.00
IUUC-Oru-084335	Oryza rufipogon	51.52	1.00e-107	382.00
IUUC-Osa-085556	Oryza sativa	51.52	1.00e-107	382.00
IUUC-Pop-099806	Populus trichocarpa	63.89	7.00e-166	576.00
IUUC-Ppe-101662	Prunus persica	63.28	3.00e-163	567.00
IUUC-Sit-110812	Setaria italica	51.41	1.00e-104	372.00
IUUC-Sly-110911	Solanum lycopersicum	59.40	2.00e-154	537.00
IUUC-Stu-112732	Solanum tuberosum	60.74	8.00e-156	542.00
IUUC-Sbi-114814	Sorghum bicolor	50.90	3.00e-105	374.00
IUUC-Tca-121080	Theobroma cacao	65.46	1.00e-172	598.00
IUUC-Tae-125809	Triticum aestivum	49.87	7.00e-92	330.00
IUUC-Tur-126060	Triticum urartu	45.15	3.00e-87	315.00
IUUC-Vvi-131168	Vitis vinifera	61.77	6.00e-161	559.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence