iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 7    lCpIslelMrd....PvvlpsGitydrssIekwlasggktcPvtrqplteedlvPn 58
           lCpI+  +M+d      ++p+G++++ s+++++   g+k c+ ++q  +e+d++P 
   Q: 104  LCPITRHVMSDtyqfAYIVPCGHVFEYSALKQF---GEKMCFQCNQVYEEKDVIPI 156
           8**********555568*************997...8889**************96 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Replication termination factor which mediates replication termination at the site-specific replication barrier RTS1. Stabilizes the replication fork stalled at RTS1 until completion of DNA synthesis by a converging replication fork initiated at a flanking origin.

Protein Sequence
(Fasta)

MGNDGGSLPT RNELVKEPGK VPPLDIDFKR SVKSSQFSQC AITDEPLYPP IVSCGLGKLY 60
NKASILQMLL DRSSVPKSPS HIKSLKDVVQ LQVELDDSGK VLWLCPITRH VMSDTYQFAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTAAATGCA GTCGTGGAAT GTAAGCGCTT CTTTGAAATA TGCTTACTTA ACACTACTCT 60
GTAATATTTA ATACACACAA GTAAACTATG GGAAATGACG GTAGGATTCG TTTATTTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0235--DNA replication
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR006735--Rtf2
IPR027799--Rtf2_RING-finger
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF04641--Rtf2

Gene Ontology

GO:0005634--C:nucleus
GO:1902979--P:mitotic DNA replication termination
GO:0071171--P:site-specific DNA replication termination at RTS1 barrier

KEGG

spo:SPAC1D4.09c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005843	Arabidopsis lyrata	31.87	3.00e-04	37.40
IUUC-Ath-007585	Arabidopsis thaliana	31.87	2.00e-04	38.50
IUUC-Acl-008175	Aspergillus clavatus	25.47	3.00e-03	34.30
IUUC-Aor-010063	Aspergillus oryzae	35.71	1.00e-34	137.00
IUUC-Bdi-014968	Brachypodium distachyon	25.71	1.00e-05	41.60
IUUC-Bol-016386	Brassica oleracea	32.26	4.00e-05	40.40
IUUC-Bra-017754	Brassica rapa	32.26	6.00e-05	39.70
IUUC-Dse-031408	Dothistroma septosporum	38.17	8.00e-24	102.00
IUUC-Dme-031734	Drosophila melanogaster	26.67	3.00e-03	33.50
IUUC-Mpo-057359	Magnaporthe poae	36.36	8.00e-03	32.30
IUUC-Mvi-060460	Microbotryum violaceum	27.59	1.00e-04	38.10
IUUC-Oba-075284	Oryza barthii	25.71	2.00e-05	41.20
IUUC-Ogl-077899	Oryza glaberrima	25.71	2.00e-05	41.20
IUUC-Ogu-078477	Oryza glumaepatula	25.71	2.00e-05	41.20
IUUC-Oin-080011	Oryza indica	25.71	2.00e-05	41.20
IUUC-Ome-081543	Oryza meridionalis	25.71	2.00e-05	41.20
IUUC-Oni-082955	Oryza nivara	25.71	2.00e-05	41.20
IUUC-Opu-083565	Oryza punctata	25.71	9.00e-06	42.40
IUUC-Oru-084474	Oryza rufipogon	25.71	2.00e-05	41.20
IUUC-Osa-085913	Oryza sativa	25.71	2.00e-05	41.20
IUUC-Pop-099896	Populus trichocarpa	32.39	1.00e-05	42.40
IUUC-Ppe-101532	Prunus persica	27.61	5.00e-05	40.40
IUUC-Sit-110307	Setaria italica	24.29	3.00e-05	40.40
IUUC-Sbi-113939	Sorghum bicolor	22.86	1.00e-05	42.00
IUUC-Tca-121309	Theobroma cacao	29.41	8.00e-04	36.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence