iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111668

Ensembl Protein ID

Solyc04g016510.2.1

UniProt Accession

K4BQF1; K4BQF1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g016510.2	Solyc04g016510.2.1	Solyc04g016510.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-42	142.0	360	394
UBD/Beta-Prp	1.50e-63	215.5	203	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH  +v +++f ++  +l+sG+ D+t+++WDlr+ 
   Q: 360  GHVKPVLGVSFsPNgYHLASGGEDNTCRIWDLRQR 394
           899*********77799**************9975 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
            s d+++lat s +g  k+w++ + +++++l+gh++  t+v fsp++++l+t+s D+t+++w+ + g+ ++t++gh d++  ++f+psg++
   Q: 203  LSHDGKMLATCSLSGIAKIWSMPQVQKVSTLKGHTERATDVVFSPTSNYLATASADKTARLWNSE-GSLLRTFEGHLDRLARIAFHPSGKY 292
           4789**********************************************************965.889********************** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           l ++s d+t r+w++e+g++l  +++gh+++v ++++h dg+l++s++lD  vr+Wdl+tg+ +  l+g h ++v  +sf++ng +l+sg+
   Q: 293  LGTASFDKTWRLWNVESGEELL-LQEGHSRSVYGLSFHHDGSLVASCGLDALVRVWDLRTGRSILALEG-HVKPVLGVSFSPNGYHLASGG 381
           **********************.*********************************************9.********************* PP
   S: 200  ldgtvklwdlqtgecvrtlnghtdnvksvrfspnd 234
           +d+t ++wdl++ +  ++  +h++ +++v+f p++
   Q: 382  EDNTCRIWDLRQRRSSYIIPAHSNLISQVKFEPQE 416
           *******************************9876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MQENDSDSDL EEMVSGRGAA GSTQEYEISE ESRIVRERQE KALQELLMKR RAAALAVPTN 60
DMAVRARLRR LGEPITLFGE REMERRDRLR MLMARLDAEG QLEKLMKAHE DEEAAASAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCAATTG CTCCAAGGCT TGCAGTTCCT CCCCCTATTC CTCCCCCATT AGCTCCGTTG 60
CCTGTTCGTC CACCTGTCCT TAGGCCTCCG GTAGCACAGA ATGGAGAAAT GCAAGAGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	67.74	2.00e-167	580.00
IUUC-Aml-001737	Ailuropoda melanoleuca	45.67	3.00e-118	418.00
IUUC-Atr-002828	Amborella trichopoda	72.32	0.00e+00	656.00
IUUC-Apl-003723	Anas platyrhynchos	45.56	3.00e-116	411.00
IUUC-Aca-004972	Anolis carolinensis	45.26	2.00e-116	411.00
IUUC-Aly-006531	Arabidopsis lyrata	68.72	1.00e-171	595.00
IUUC-Ath-007367	Arabidopsis thaliana	68.49	0.00e+00	662.00
IUUC-Ago-007893	Ashbya gossypii	31.66	5.00e-57	214.00
IUUC-Acl-008236	Aspergillus clavatus	36.09	1.00e-73	270.00
IUUC-Afl-008522	Aspergillus flavus	37.47	7.00e-80	290.00
IUUC-Afu-008904	Aspergillus fumigatus	37.28	1.00e-79	289.00
IUUC-Ani-009198	Aspergillus nidulans	37.25	1.00e-79	290.00
IUUC-Ang-009662	Aspergillus niger	38.34	9.00e-83	300.00
IUUC-Aor-009881	Aspergillus oryzae	37.47	2.00e-79	288.00
IUUC-Ate-010333	Aspergillus terreus	35.73	8.00e-73	266.00
IUUC-Ame-011697	Astyanax mexicanus	43.81	5.00e-114	403.00
IUUC-Bgr-012254	Blumeria graminis	35.79	7.00e-81	293.00
IUUC-Bta-012615	Bos taurus	45.67	2.00e-118	418.00
IUUC-Bci-013720	Botrytis cinerea	37.22	4.00e-88	317.00
IUUC-Bdi-014302	Brachypodium distachyon	69.73	0.00e+00	626.00
IUUC-Bol-015594	Brassica oleracea	69.15	0.00e+00	632.00
IUUC-Bra-017465	Brassica rapa	70.80	0.00e+00	632.00
IUUC-Cel-018632	Caenorhabditis elegans	36.08	4.00e-75	274.00
IUUC-Cja-019747	Callithrix jacchus	45.67	1.00e-118	419.00
IUUC-Cfa-020288	Canis familiaris	45.67	2.00e-118	418.00
IUUC-Cpo-021440	Cavia porcellus	45.71	6.00e-118	417.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	49.72	4.00e-96	343.00
IUUC-Csa-023139	Chlorocebus sabaeus	50.30	3.00e-99	353.00
IUUC-Cho-024481	Choloepus hoffmanni	45.18	2.00e-116	411.00
IUUC-Cin-025106	Ciona intestinalis	40.48	6.00e-101	360.00
IUUC-Csv-026087	Ciona savignyi	41.92	6.00e-102	363.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	35.37	1.00e-80	293.00
IUUC-Cne-026793	Cryptococcus neoformans	38.45	5.00e-92	330.00
IUUC-Dre-028723	Danio rerio	42.86	2.00e-111	395.00
IUUC-Dno-029299	Dasypus novemcinctus	45.45	4.00e-118	417.00
IUUC-Dse-031562	Dothistroma septosporum	34.07	7.00e-72	263.00
IUUC-Dme-031783	Drosophila melanogaster	43.57	7.00e-92	330.00
IUUC-Ete-032669	Echinops telfairi	45.81	8.00e-120	423.00
IUUC-Eca-033566	Equus caballus	45.67	3.00e-118	418.00
IUUC-Eeu-034524	Erinaceus europaeus	51.46	3.00e-73	268.00
IUUC-Fca-036215	Felis catus	45.67	2.00e-118	418.00
IUUC-Fal-037018	Ficedula albicollis	44.56	4.00e-93	334.00
IUUC-Fox-037936	Fusarium oxysporum	33.61	9.00e-71	260.00
IUUC-Fso-038366	Fusarium solani	34.02	3.00e-76	278.00
IUUC-Gmo-038966	Gadus morhua	46.13	2.00e-88	318.00
IUUC-Ggr-039942	Gaeumannomyces graminis	34.77	1.00e-70	259.00
IUUC-Gga-040797	Gallus gallus	45.22	9.00e-117	412.00
IUUC-Gac-042598	Gasterosteus aculeatus	45.71	5.00e-104	370.00
IUUC-Gma-044220	Glycine max	80.65	0.00e+00	711.00
IUUC-Ggo-044682	Gorilla gorilla	45.28	4.00e-118	417.00
IUUC-Hsa-045804	Homo sapiens	45.67	1.00e-118	419.00
IUUC-Hvu-047567	Hordeum vulgare	66.67	2.00e-159	554.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	45.89	6.00e-119	420.00
IUUC-Kpa-049369	Komagataella pastoris	35.56	3.00e-60	224.00
IUUC-Lch-050074	Latimeria chalumnae	44.18	1.00e-107	382.00
IUUC-Lpe-051333	Leersia perrieri	66.82	6.00e-160	556.00
IUUC-Loc-052164	Lepisosteus oculatus	43.81	3.00e-114	404.00
IUUC-Lma-053088	Leptosphaeria maculans	37.39	5.00e-75	274.00
IUUC-Laf-053460	Loxodonta africana	45.67	2.00e-118	418.00
IUUC-Mcc-055859	Macaca mulatta	45.67	2.00e-118	418.00
IUUC-Meu-056134	Macropus eugenii	45.89	2.00e-118	418.00
IUUC-Mor-057251	Magnaporthe oryzae	35.44	3.00e-78	285.00
IUUC-Mpo-057375	Magnaporthe poae	39.20	7.00e-52	196.00
IUUC-Mtr-057656	Medicago truncatula	80.85	0.00e+00	629.00
IUUC-Mla-059145	Melampsora laricipopulina	40.81	2.00e-87	315.00
IUUC-Mga-059855	Meleagris gallopavo	45.56	2.00e-116	412.00
IUUC-Mvi-060372	Microbotryum violaceum	41.54	6.00e-80	290.00
IUUC-Mmr-060826	Microcebus murinus	45.67	2.00e-118	418.00
IUUC-Mdo-062748	Monodelphis domestica	46.32	7.00e-119	419.00
IUUC-Mmu-063351	Mus musculus	45.67	4.00e-118	417.00
IUUC-Mac-064846	Musa acuminata	74.14	2.00e-173	601.00
IUUC-Mpu-066006	Mustela putorius furo	45.67	2.00e-118	418.00
IUUC-Mlu-067398	Myotis lucifugus	45.67	3.00e-118	417.00
IUUC-Nfi-068399	Neosartorya fischeri	36.19	1.00e-81	296.00
IUUC-Ncr-068711	Neurospora crassa	35.82	7.00e-82	296.00
IUUC-Nle-069982	Nomascus leucogenys	45.67	1.00e-118	419.00
IUUC-Opr-070596	Ochotona princeps	45.20	9.00e-119	419.00
IUUC-Ont-072374	Oreochromis niloticus	46.53	7.00e-108	383.00
IUUC-Oan-073166	Ornithorhynchus anatinus	48.07	3.00e-101	361.00
IUUC-Ocu-074371	Oryctolagus cuniculus	45.89	6.00e-119	420.00
IUUC-Oba-075083	Oryza barthii	66.88	4.00e-171	593.00
IUUC-Obr-076405	Oryza brachyantha	67.97	5.00e-164	569.00
IUUC-Ogl-077683	Oryza glaberrima	66.52	3.00e-170	590.00
IUUC-Ogu-078486	Oryza glumaepatula	67.03	5.00e-170	590.00
IUUC-Oin-079679	Oryza indica	67.03	3.00e-173	600.00
IUUC-Olo-080243	Oryza longistaminata	66.50	5.00e-149	519.00
IUUC-Ome-081230	Oryza meridionalis	67.03	2.00e-173	601.00
IUUC-Oni-082961	Oryza nivara	67.03	1.00e-173	601.00
IUUC-Opu-083189	Oryza punctata	67.24	4.00e-175	607.00
IUUC-Oru-084353	Oryza rufipogon	67.74	2.00e-167	581.00
IUUC-Osa-085458	Oryza sativa	67.03	2.00e-173	601.00
IUUC-Ola-086940	Oryzias latipes	45.36	3.00e-114	404.00
IUUC-Olu-087580	Ostreococcus lucimarinus	39.79	3.00e-76	278.00
IUUC-Oga-088703	Otolemur garnettii	43.82	3.00e-112	398.00
IUUC-Oar-089829	Ovis aries	45.89	8.00e-119	419.00
IUUC-Ptr-090838	Pan troglodytes	45.67	1.00e-118	419.00
IUUC-Pan-092261	Papio anubis	45.57	5.00e-117	414.00
IUUC-Psi-093020	Pelodiscus sinensis	44.99	4.00e-116	410.00
IUUC-Pno-094858	Phaeosphaeria nodorum	38.88	2.00e-77	282.00
IUUC-Ppa-095531	Physcomitrella patens	62.76	3.00e-166	577.00
IUUC-Pfo-096812	Poecilia formosa	42.96	4.00e-88	317.00
IUUC-Pab-097805	Pongo abelii	48.88	7.00e-99	353.00
IUUC-Pop-100051	Populus trichocarpa	77.27	0.00e+00	685.00
IUUC-Pca-100152	Procavia capensis	45.67	1.00e-118	419.00
IUUC-Ppe-101244	Prunus persica	78.56	0.00e+00	644.00
IUUC-Pva-102529	Pteropus vampyrus	43.94	2.00e-111	395.00
IUUC-Pgr-103550	Puccinia graminis	36.65	2.00e-92	332.00
IUUC-Ptt-103951	Puccinia triticina	34.35	1.00e-62	233.00
IUUC-Pte-104151	Pyrenophora teres	35.47	4.00e-71	261.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	35.68	1.00e-71	263.00
IUUC-Rno-105747	Rattus norvegicus	45.89	2.00e-118	418.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.18	4.00e-63	234.00
IUUC-Sha-107334	Sarcophilus harrisii	45.89	2.00e-118	418.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	36.40	2.00e-66	245.00
IUUC-Spo-108189	Schizosaccharomyces pombe	40.09	1.00e-84	306.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	37.01	2.00e-88	318.00
IUUC-Smo-109578	Selaginella moellendorffii	60.81	3.00e-160	557.00
IUUC-Sit-110102	Setaria italica	67.31	6.00e-174	602.00
IUUC-Stu-111928	Solanum tuberosum	99.39	0.00e+00	846.00
IUUC-Sar-113266	Sorex araneus	40.04	9.00e-99	353.00
IUUC-Sbi-114134	Sorghum bicolor	66.67	7.00e-174	602.00
IUUC-Sre-115114	Sporisorium reilianum	39.75	5.00e-90	323.00
IUUC-Ssc-115443	Sus scrofa	45.67	2.00e-118	418.00
IUUC-Tgu-117157	Taeniopygia guttata	45.78	7.00e-118	416.00
IUUC-Tru-118587	Takifugu rubripes	45.52	1.00e-108	385.00
IUUC-Tsy-119157	Tarsius syrichta	49.58	1.00e-104	373.00
IUUC-Tni-120427	Tetraodon nigroviridis	46.12	9.00e-110	389.00
IUUC-Tca-121368	Theobroma cacao	78.73	0.00e+00	728.00
IUUC-Tre-122074	Trichoderma reesei	34.14	3.00e-75	275.00
IUUC-Tvi-122349	Trichoderma virens	33.74	3.00e-74	271.00
IUUC-Tae-125651	Triticum aestivum	67.71	5.00e-172	596.00
IUUC-Tur-126532	Triticum urartu	69.87	1.00e-148	518.00
IUUC-Tme-126951	Tuber melanosporum	36.98	8.00e-81	293.00
IUUC-Tbe-128136	Tupaia belangeri	41.77	1.00e-103	369.00
IUUC-Ttr-129169	Tursiops truncatus	37.58	8.00e-53	200.00
IUUC-Uma-129399	Ustilago maydis	36.88	2.00e-85	308.00
IUUC-Vda-129842	Verticillium dahliae	34.80	8.00e-81	293.00
IUUC-Vpa-130440	Vicugna pacos	45.67	2.00e-118	419.00
IUUC-Vvi-131075	Vitis vinifera	82.98	0.00e+00	695.00
IUUC-Xma-133002	Xiphophorus maculatus	48.18	2.00e-96	344.00
IUUC-Yli-134569	Yarrowia lipolytica	36.48	1.00e-73	269.00
IUUC-Zma-135799	Zea mays	63.97	3.00e-172	597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence