iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095626

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

TIRB2 TIR1-like auxin receptor protein

Genbank Nucleotide ID

DS545085

Gene Name

TIRB2; PHYPADRAFT_193240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S16_2V6	PP1S16_2V6.1	PP1S16_2V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	54.07	1.00e-179	626.00	IUUC-Ath-007194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MPPSVFPDEV LEHVLVFLDS HRDRNSVSLV CKAWYKAEGW SRRRVFIGNC YAASPAHLIK 60
RFPKLVALEM KGRPRFTDFG LVPQNWGAFI QPWIEAMAEY YPGLEELKLK RMTVSDESLR 120

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Nucleotide Sequence
(Fasta)

ATGCCCCCAT CGGTCTTCCC AGACGAGGTT CTCGAACACG TCTTGGTCTT TCTGGATTCC 60
CATAGGGACA GAAACTCTGT CTCGCTGGTG TGCAAAGCCT GGTACAAGGC CGAGGGATGG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0675--Receptor
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF13516--LRR_6

SMART

SM00367--LRR_CC

Gene Ontology

GO:0000822--F:inositol hexakisphosphate binding
GO:0009734--P:auxin-activated signaling pathway

KEGG

ppp:PHYPADRAFT_193240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000251	Aegilops tauschii	51.13	1.00e-157	548.00
IUUC-Atr-002877	Amborella trichopoda	55.05	0.00e+00	635.00
IUUC-Aly-005635	Arabidopsis lyrata	54.26	0.00e+00	628.00
IUUC-Ath-007194	Arabidopsis thaliana	54.07	4.00e-175	607.00
IUUC-Bdi-014864	Brachypodium distachyon	53.73	7.00e-171	592.00
IUUC-Bol-015221	Brassica oleracea	54.43	2.00e-180	625.00
IUUC-Bra-017679	Brassica rapa	55.07	0.00e+00	633.00
IUUC-Gma-043882	Glycine max	54.12	2.00e-176	611.00
IUUC-Hvu-047360	Hordeum vulgare	54.69	5.00e-173	600.00
IUUC-Lpe-051628	Leersia perrieri	53.66	3.00e-171	594.00
IUUC-Mtr-058259	Medicago truncatula	53.94	1.00e-180	625.00
IUUC-Mac-064750	Musa acuminata	51.82	2.00e-162	564.00
IUUC-Oba-075353	Oryza barthii	53.66	1.00e-169	589.00
IUUC-Obr-076616	Oryza brachyantha	53.38	7.00e-170	589.00
IUUC-Ogl-077636	Oryza glaberrima	53.73	6.00e-171	593.00
IUUC-Ogu-078337	Oryza glumaepatula	53.66	1.00e-169	588.00
IUUC-Oin-079789	Oryza indica	53.73	6.00e-171	593.00
IUUC-Olo-080406	Oryza longistaminata	53.89	8.00e-163	566.00
IUUC-Ome-081861	Oryza meridionalis	53.73	3.00e-171	594.00
IUUC-Oni-082544	Oryza nivara	53.66	1.00e-169	589.00
IUUC-Opu-083530	Oryza punctata	53.55	1.00e-170	592.00
IUUC-Oru-084887	Oryza rufipogon	53.66	5.00e-169	587.00
IUUC-Osa-085607	Oryza sativa	53.73	1.00e-170	592.00
IUUC-Pop-099684	Populus trichocarpa	53.59	3.00e-178	617.00
IUUC-Ppe-101640	Prunus persica	56.10	0.00e+00	636.00
IUUC-Smo-108880	Selaginella moellendorffii	53.95	0.00e+00	640.00
IUUC-Sit-110014	Setaria italica	53.81	7.00e-169	586.00
IUUC-Sly-111582	Solanum lycopersicum	51.92	2.00e-176	611.00
IUUC-Stu-112711	Solanum tuberosum	51.31	8.00e-176	609.00
IUUC-Sbi-114607	Sorghum bicolor	53.99	5.00e-175	606.00
IUUC-Tca-121184	Theobroma cacao	56.29	3.00e-171	594.00
IUUC-Tae-124534	Triticum aestivum	54.34	3.00e-172	597.00
IUUC-Tur-126235	Triticum urartu	54.51	1.00e-172	598.00
IUUC-Vvi-131655	Vitis vinifera	56.82	0.00e+00	641.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence